Scientific Computing Core

The Scientific Computing Core (SCC) is part of the Flatiron Institute and is led by co-directors Nick Carriero and Ian Fisk. This core develops and deploys the computing infrastructure — including new computational and statistical methods and storage and data handling systems — necessary for carrying out the centers’ research. It also acts as a creator and disseminator of software tools for use by various scientific communities.

Nickolas Carriero

Nick Carriero, Ph.D.

Co-Director, Scientific Computing Core

Nick Carriero came to the Simons Foundation in 2014 from Yale University, where he was a senior research scientist in computer science and co-director of the W.M. Keck Biotechnology Resource Laboratory’s high-performance computing resource. at the Yale School of Medicine. At the Keck lab, Carriero worked with information technology services to deploy Yale’s first high-performance computing resource devoted specifically to the life sciences. Additionally, he worked with researchers to develop efficient workflows for processing data on cluster computers, optimized existing software and wrote new software to support novel high-throughput sequencing applications. Carriero holds an M.S. in computer science from Stony Brook University and a Ph.D. in computer science from Yale University.

Ian Fisk

Ian Fisk, Ph.D.

Co-Director, Scientific Computing Core

Ian Fisk came to the Simons Foundation in 2014 after working in the computing division at the Fermi National Accelerator Laboratory in Illinois since 2003. Fisk was the Compact Muon Solenoid (CMS) experiment’s computing coordinator at CERN from 2010 to 2013, overseeing operations and improvements for the global CMS computing infrastructure. Before that, Fisk served in several roles to prepare the experiment for the first run. He oversaw service integration, facility development and operations, and project management. Fisk holds an M.S. and a Ph.D. in physics from the University of California, San Diego.

John Hayward

John Hayward, M.S.

Senior Software Engineer, Center for Computational Biology

John Hayward joined the Simons Foundation in 2016 as a senior software engineer in Center for Computational Biology’s genomics group. Before joining the foundation, Hayward worked as a research and development analyst for the Bloomberg Tokyo Marunouchi office, adapting East Asian market data feeds for the Bloomberg news and financial analysis services. Prior to this, he was an associate engineer with the Air Traffic Control Systems Group at the Massachusetts Institute of Technology Lincoln Laboratory, serving as a principal developer for the Route Availability Planning Tool, an automated decision system for air traffic congestion management currently in nationwide deployment. In graduate school, he was a researcher in the surgical oncology division of the University of Massachusetts Memorial Medical School, where he studied predictive modeling in the clinical performance of gastrointestinal cancer patients, focusing on pancreatic adenocarcinoma. He holds an M.S. in computer science from Worcester Polytechnic Institute and a B.S. in computer science from the University of Massachusetts Amherst.

Andras Pataki

Andras Pataki, Ph.D.

Senior Data Scientist, Scientific Computing Core

Andras Pataki joined the Scientific Computing Core in 2015 to work on research and software development in scientific computing, data visualization and other data-intensive computing projects. Pataki comes to the foundation from the global financial services firm KCG, where he was a quantitative strategist in the options market making and customer order routing group. He holds a B.S. in computer science from the Stevens Institute of Technology and a Ph.D. in mathematics from the Courant Institute of Mathematical Sciences at New York University, where he worked on numerical analysis problems in plasma physics and fusion research.

A. Mark Roberts

A. Mark Roberts, Ph.D.

Data Scientist, Scientific Computing Core

Mark Roberts joined the Scientific Computing Core in 2016 as a data scientist in the computing group. He develops robust and efficient systems for functional genomics in collaboration with the center’s genomics group and integrates them into a widely used open-source software platform for data analysis. Roberts worked as a consultant at the foundation starting in June 2015 before joining the staff full time. Previously, he was a quantitative analyst at Citigroup. He has a Ph.D. in electrical engineering from Princeton University, where his research focused on novel computer architectures for fast cryptography.

Nikos Trikoupis

Nikos Trikoupis, M.B.A.

System Architect, SCC

Nikos Trikoupis joined the foundation as a systems architect in the Scientific Computing Core in October 2016. Trikoupis comes to the foundation from the City University of New York where he was a high performance computing systems architect. He will participate in the design, planning, acquisition and operations of data processing resources for the foundation’s computational centers.

Aaron Watters

Aaron Watters, Ph.D.

Senior Software Engineer, Scientific Computing Core

Aaron Watters joined the Scientific Computing Core in 2015 to develop tools that will help biologists examine, manage and process data generated by gene expression and regulatory networks experiments. Previously, Watters worked at Enthought, Inc. as a scientific software engineer, where he consulted on projects related to chemical process control and credit risk assessment and helped design and develop Enthought Web services and applications. Before that, Watters worked at Audible, Inc. where he integrated Audible’s databases and services into Amazon’s standard infrastructure. Watters also has extensive experience creating and contributing to open source projects related to database development and implementation. He holds a Ph.D. in computer science from the University of Pennsylvania and a B.S. in mathematics from the University of California, Davis.