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Flatiron Institute Scientific Computing Core

Scientific Computing Core: Publications

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  1. Heterogeneity in ligand-bound TRPV1: A comparison of methods in cryo-EM and molecular dynamics simulation

    bioRxiv, October 11, 2024

    M. Astore, R. Blackwell, David Silva-Sánchez, P. Cossio, and S. Hanson

  2. Shader-Like Computations in WebGL for Advanced Graphics and General Purposes

    Institute of Electrical and Electronics Engineers, January 25, 2021

    A. Watters

  3. Learning representations of microbe-metabolite interactions

    Nature Methods, PubMed: 31686038, December 16, 2019

    J. Morton, A. A. Aksenov, L. F. Nothias, J. R. Foulds, R. A. Quinn, M. H. Badri, et al.

  4. Distinct Polysaccharide Utilization Profiles of Human Intestinal Prevotella copri Isolates

    Cell Host & Microbe, November 13, 2019

    H. Fehlner-Peach, C. Magnabosco, V. Raghavan, J. U. Scher, A. Tett, L. M. Cox, et al.

  5. Characterization of Transcriptional Regulatory Networks that Promote and Restrict Identities and Functions of Intestinal Innate Lymphoid Cells

    Immunity, July 16, 2019

    M. Pokrovskii, J. A. Hall, D. E. Ochayon, R. Yi, N. S. Chaimowitz, H. Seelamneni, et al.

  6. Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis

    Science, April 5, 2019

    S. Maniatis, T. Äijö, S. Vickovic, C. Braine, K. Kang, A. Mollbrink, et al.

  7. Leveraging chromatin accessibility for transcriptional regulatory network inference in T Helper 17 Cells

    Genome Research, January 15, 2019

    E. Miraldi, M. Pokrovskii, A. Watters, D. M. Castro, N. De Veaux, J. A. Hall, et al.

  8. Marching Pentatopes for Continuous Morphing of Isosurfaces From Four Dimensional Data in HTML5/WebGL

    EuroVis 2017, Github:AaronWatters/contourist, 2017

    A. Watters

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