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Flatiron Institute Initiative for Computational Catalysis

Initiative for Computational Catalysis: Publications

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  1. Size-Consistent Adiabatic Connection Functionals via Orbital-Based Matrix Interpolation.

    Journal of Chemical Theory and Computation, arxiv:2511.01961, January 27, 2026

    K. Bystrom and Timothy C Berkelbach

  2. Automated Machine Learning Pipeline: Large Language Models-Assisted Automated Data set Generation for Training Machine-Learned Interatomic Potentials.

    Journal of Chemical Theory and Computation, arxiv:2509.21647, January 13, 2026

    Adam Lahouari, J. Rogal, and Mark E Tuckerman

  3. Assessing generative modeling approaches for free energy estimates in condensed matter

    arxiv:2512.23930, December 30, 2025

    Maximilian Schebek, Jiajun He, Emil Hoffmann, Yuanqi Du, Frank Noé, and J. Rogal

  4. Estimating Solvation Free Energies with Boltzmann Generators

    arxiv:2512.18147, December 20, 2025

    Maximilian Schebek, Nikolas M. Froböse, Bettina G. Keller, and J. Rogal

  5. Towards Routine Condensed Phase Simulations with Delta-Learned Coupled Cluster Accuracy: Application to Liquid Water.

    Journal of Chemical Theory and Computation, arxiv:2508.13391, November 25, 2025

    Niamh O'Neill, Benjamin X Shi, William J Baldwin, William C Witt, Gábor Csányi, Julian D Gale, et al.

  6. MXtalTools: A Toolkit for Machine Learning on Molecular Crystals

    arxiv:2511.20327, November 25, 2025

    Michael Kilgour, Mark E. Tuckerman, and J. Rogal

  7. An accurate and efficient framework for modelling the surface chemistry of ionic materials.

    Nature Chemistry, arxiv:2412.17204, November 2025

    Benjamin X Shi, Andrew S Rosen, Tobias Schäfer, Andreas Grüneis, Venkat Kapil, Andrea Zen, et al.

  8. Photoinduced twist and untwist of moiré superlattices.

    Nature, arxiv:2502.11452, November 2025

    Cameron J R Duncan, Amalya C Johnson, Indrajit Maity, A. Rubio, Matthew Gordon, Adam C Bartnik, et al.

  9. Polaritonic quantum matter.

    Nanophotonics (Berlin, Germany), arxiv:2505.05285, November 2025

    D N Basov, A. Asenjo-Garcia, P James Schuck, Xiaoyang Zhu, A. Rubio, Andrea Cavalleri, et al.

  10. Cavity-mediated electron-electron interactions: Renormalizing Dirac states in graphene.

    Science Advances, October 24, 2025

    Hang Liu, Francesco Troisi, Hannes Hübener, Simone Latini, and A. Rubio

  11. Visible Imaging of Incoherent 1200-nm Light via Triplet--Triplet Annihilation Upconversion

    arxiv:2510.15184, October 16, 2025

    Pournima Narayanan, Rabeeya Hamid, Linda Pucurimay, Ona Segura Lecina, Ben P. Carwithen, Jacob Schopp, et al.

  12. Bosonic entanglement and quantum sensing from energy transfer in two-tone Floquet systems

    Physical Review Research, arxiv:2410.11158, October 3, 2025

    Yinan Chen, Andreas Elben, A. Rubio, and G. Refael

  13. Scalable Boltzmann Generators for equilibrium sampling of large-scale materials

    arxiv:2509.25486, September 29, 2025

    Maximilian Schebek, Frank Noé, and J. Rogal

  14. Molecular Plasmonic Cavities.

    Nano Letters, September 24, 2025

    Daniel J Rizzo, Michael Riehs, Hang Liu, Dongbin Shin, Takashi Taniguchi, Kenji Watanabe, et al.

  15. The Good, the Bad, and the Ugly of Atomistic Learning for "Clusters-to-Bulk" Generalization

    arxiv:2509.16601, September 20, 2025

    Mikołaj J. Gawkowski, Mingjia Li, Benjamin X. Shi, and Venkat Kapil

  16. Multi-type point cloud autoencoder: a complete equivariant embedding for molecule conformation and pose

    Machine Learning: Science and Technology, arxiv:2405.13791, September 17, 2025

    Michael Kilgour, Mark E Tuckerman, and J. Rogal

  17. Reaction dynamics of lithium-mediated electrolyte decomposition using machine learning potentials

    arxiv:2509.14067, September 17, 2025

    Sohang Kundu, Diana Chamaki, Hong-Zhou Ye, Garvit Agarwal, and Timothy C. Berkelbach

  18. Exact mid-IR quantum vibrational spectra of neutral water clusters

    arxiv:2509.13517, September 16, 2025

    Henry K. Tran and Timothy C. Berkelbach

  19. Extending Orbital-Optimized Density Functional Theory to L-Edge XPS and Beyond: Spin-Orbit Coupling via Nonorthogonal Quasi-Degenerate Perturbation Theory.

    Journal of Chemical Theory and Computation, arxiv:2505.14570, September 9, 2025

    Richard Kang, Leonardo A Cunha, D. Hait, and Martin Head-Gordon

  20. Dynamic control of electron correlations in photodoped charge-transfer insulators.

    Science Advances, September 5, 2025

    Thomas C Rossi, Nicolas Tancogne-Dejean, Malte Oppermann, Michael Porer, Arnaud Magrez, Rajesh V Chopdekar, et al.

  21. Light-Induced Persistent Electronic Chirality in Achiral Molecules Probed with Time-Resolved Electronic Circular Dichroism Spectroscopy.

    The Journal of Physical Chemistry Letters, arxiv:2503.16986, September 4, 2025

    Torsha Moitra, Lukas Konecny, Marius Kadek, Ofer Neufeld, A. Rubio, and Michal Repisky

  22. Relativistic Linear Response in Quantum-Electrodynamical Density Functional Theory

    Physical Review X, arxiv:2407.02441, August 25, 2025

    Lukas Konecny, Valeriia P. Kosheleva, Heiko Appel, Michael Ruggenthaler, and A. Rubio

  23. Floquet optical selection rules in black phosphorus.

    Science Advances, arxiv:2501.15703, August 22, 2025

    Benshu Fan, Umberto De Giovannini, Hannes Hübener, Shuyun Zhou, Wenhui Duan, A. Rubio, et al.

  24. Equilibrium nonlinear phononics by electric field fluctuations of terahertz cavities

    Physical Review Research, August 15, 2025

    Emil Viñas Boström, Marios H. Michael, Christian Eckhardt, and A. Rubio

  25. Modifying electronic and structural properties of 2D van der Waals materials via cavity quantum vacuum fluctuations: a first-principles QEDFT study [Invited]

    Optical Materials Express, arxiv:2507.16992, August 7, 2025

    Hang Liu, Simone Latini, I-Te Lu, Dongbin Shin, and A. Rubio

  26. Core binding energies of solids with periodic EOM-CCSD

    arxiv:2508.00168, July 31, 2025

    Ethan A. Vo and Timothy C. Berkelbach

  27. Polarized Houston State Framework for Nonequilibrium Driven Open Quantum Systems

    arxiv:2507.20160, July 27, 2025

    Shunsuke A. Sato, Hannes Hübener, Umberto De Giovannini, and A. Rubio

  28. Terahertz control of linear and nonlinear Magno-phononics.

    Nature Communications, July 25, 2025

    Tianchuang Luo, Honglie Ning, Batyr Ilyas, Alexander von Hoegen, Emil Viñas Boström, Jaena Park, et al.

  29. Technical review: Time-dependent density functional theory for attosecond physics ranging from gas-phase to solids

    Npj Computational Materials, July 15, 2025

    Shunsuke A. Sato, Hannes Hübener, Umberto De Giovannini, and A. Rubio

  30. Strong anharmonicity dictates ultralow thermal conductivities of type-I clathrates

    Physical Review B, arxiv:2409.08242, July 10, 2025

    Dipti Jasrasaria and Timothy C. Berkelbach

  31. Efficient time-dependent Wannier functions for ultrafast dynamics

    Physical Review Research, June 26, 2025

    Cristian M. Le, Hannes Hübener, Ofer Neufeld, and A. Rubio

  32. Cavity Spectroscopy for Strongly Correlated Polaritonic Systems.

    Physical Review Letters, June 20, 2025

    Lukas Grunwald, Emil Viñas Boström, Mark Kamper Svendsen, Dante M Kennes, and A. Rubio

  33. Improved energies and wave function accuracy with Weighted Variational Monte Carlo

    arxiv:2507.01905, June 17, 2025

    Huan Zhang, Robert J. Webber, Michael Lindsey, Timothy C. Berkelbach, and Jonathan Weare

  34. Driven Similarity Renormalization Group with a Large Active Space: Applications to Oligoacenes, Zeaxanthin, and Chromium Dimer.

    Journal of Chemical Theory and Computation, arxiv:2503.01299, June 10, 2025

    Chenyang Li, Xiaoxue Wang, . Zhai, and Wei-Hai Fang

  35. Cavity engineering of solid-state materials without external driving

    Advances in Optics and Photonics, May 21, 2025

    I-Te Lu, Dongbin Shin, Mark Kamper Svendsen, Simone Latini, Hannes Hübener, Michael Ruggenthaler, et al.

  36. Beyond Electric-Dipole Treatment of Light-Matter Interactions in Materials: Nondipole Harmonic Generation in Bulk Si.

    Physical Review Letters, May 16, 2025

    Simon Vendelbo Bylling Jensen, Nicolas Tancogne-Dejean, A. Rubio, and Lars Bojer Madsen

  37. Neural network distillation of orbital dependent density functional theory

    Physical Review Research, arxiv:2410.16408, May 2, 2025

    Matija Medvidović, Jaylyn C. Umana, Iman Ahmadabadi, D. Di Sante, J. Flick, and A. Rubio

  38. Observation of Floquet–Bloch states in monolayer graphene

    Nature Physics, May 1, 2025

    Dongsung Choi, Masataka Mogi, Umberto De Giovannini, Doron Azoury, Baiqing Lv, Yifan Su, et al.

  39. Quantum melting of generalized electron crystal in twisted bilayer MoSe2.

    Nature Communications, April 30, 2025

    Qi Jun Zong, Haolin Wang, Q. Zhang, Xinle Cheng, Yangchen He, Qiaoling Xu, et al.

  40. Diabatic States of Charge Transfer with Constrained Charge Equilibration.

    Journal of Chemical Theory and Computation, arxiv:2411.04807, April 8, 2025

    Sohang Kundu, Hong-Zhou Ye, and Timothy C Berkelbach

  41. Local-Density Correlation Functional from the Force-Balance Equation.

    The Journal of Physical Chemistry. A, April 3, 2025

    Nicolas Tancogne-Dejean, Markus Penz, Michael Ruggenthaler, and A. Rubio

  42. Phaseless Auxiliary-Field Quantum Monte Carlo Method for Cavity-QED Matter Systems.

    Journal of Chemical Theory and Computation, March 25, 2025

    L. Weber, L. dos Anjos Cunha, Miguel A Morales, A. Rubio, and S. Zhang

  43. Efficient Implementation of the Random Phase Approximation with Domain-Based Local Pair Natural Orbitals.

    Journal of Chemical Theory and Computation, arxiv:2411.07352, March 25, 2025

    Yu Hsuan Liang, Xing Zhang, Garnet Kin-Lic Chan, Timothy C Berkelbach, and Hong-Zhou Ye

  44. On-demand heralded MIR single-photon source using a cascaded quantum system.

    Science Advances, March 14, 2025

    Jake Iles-Smith, Mark Kamper Svendsen, A. Rubio, Martijn Wubs, and Nicolas Stenger

  45. Analytic model reveals local molecular polarizability changes induced by collective strong coupling in optical cavities

    Physical Review Research, March 5, 2025

    Jacob Horak, Dominik Sidler, Thomas Schnappinger, Wei-Ming Huang, Michael Ruggenthaler, and A. Rubio

  46. Engineering anisotropic electrodynamics at the graphene/CrSBr interface.

    Nature Communications, February 21, 2025

    Daniel J Rizzo, Eric Seewald, Fangzhou Zhao, Jordan Cox, Kaichen Xie, Rocco A Vitalone, et al.

  47. Correlation-driven attosecond photoemission delay in the plasmonic excitation of C60 fullerene.

    Science Advances, February 14, 2025

    Shubhadeep Biswas, Andrea Trabattoni, Philipp Rupp, Maia Magrakvelidze, Mohamed El-Amine Madjet, Umberto De Giovannini, et al.

  48. Full minimal coupling Maxwell-TDDFT: An ab initio framework for light-matter interaction beyond the dipole approximation

    Physical Review B, February 5, 2025

    Franco P. Bonafé, Esra Ilke Albar, Sebastian T. Ohlmann, Valeriia P. Kosheleva, Carlos M. Bustamante, Francesco Troisi, et al.

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