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Simons Foundation
Simons Foundation

Autism Research Initiative (SFARI)

  • Funding

    Explore open funding opportunities for autism research.

    Funding Opportunities

    Early Career Awards

    • Fellows to Faculty Award
    • Shenoy Undergraduate Research Fellowship in Neuroscience (SURFiN)

    Investigator Awards

    • New Ideas

    Symposia & Travel Awards

    • Conferences & Courses Award

    Shared Programs

    • Pivot Fellowship
    • Simons Society of Fellows

    Resource for Applying

    • Open Funding Opportunities
    • Policies & Procedures
    • Instructional Videos
    • Past Funded Work
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    SFARI has supported over 750 investigators studying autism-related research.

    Research Highlights

    Research

    • SFARI Investigators
    • Funded Projects
    • Publications

    Data Access & Tools

    • SFARI Base
    • SFARI Gene
    • SFARI Genomes Browser

    Centers & Initiatives

    • Simons Center for the Social Brain
    • Simons Initiative for the Developing Brain

    Collaborations & Consortia

    • SFARI Sex Differences
    • Autism Rat Models Consortium
  • Resources

    Access data, biospecimens and participant cohorts through SFARI Base.

    SFARI Base

    Cohorts & Tissue Banks

    • SPARK
    • Simons Searchlight
    • Simons Simplex Collection
    • Autism BrainNet
    • Autism Inpatient Collection

    Other Resources

    • Animal Models
    • Biospecimens
    • Research Match

    Data Access & Tools

    • SFARI Base
    • SFARI Gene
    • SFARI Genomes Browser
    • Genotypes & Phenotypes in Families
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    See the latest news and updates from SFARI.

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    SFARI’s mission is to advance the basic science of autism and related neurodevelopmental disorders.

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A circular, abstract pattern with irregular, jagged white lines and shapes on a light gray background, resembling a textured surface or cracked ground.
Autism Research Initiative (SFARI) Research

Research: Funded Projects

SFARI supports more than 250 investigators each year and has committed over $525 million to autism research since 2006.

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Results

  1. Targeting converging exons to treat autism spectrum disorders

    Funded Work
    Alternative splicing shows a unique profile in the brain and the dysregulation of alternative splicing networks has been repeatedly reported in autistic brains.
  2. Placental neurosteroids in autism

    Funded Work
    Placental dysfunction is highly associated with abnormal fetal brain development and neurodevelopmental disorders such as autism.
  3. Circuit mechanisms mediating social attachment deficits in ASD

    Funded Work
    Disruptions in social attachment and cognition occur in the context of autism spectrum disorder (ASD).
  4. The role of the LC-NE system in perceptual deficits in a SHANK3 mouse model

    Funded Work
    Atypical sensory processing is widely observed in individuals with autism spectrum disorder (ASD) although the underlying biological mechanisms are unknown.
  5. Testing computational theories of visual processing in ASD with a novel integrated approach

    Funded Work
    A fundamental function of sensory systems is to segment sensory inputs into distinct perceptual objects (termed perceptual grouping and segmentation, PGS).
  6. Boosting myelination as a therapeutic strategy in autism

    Funded Work
    Myelin, the lipid bilayer wrapping axons, contributes to increasing the conduction velocity of axons and to providing axonal metabolic support.
  7. Elucidating the function of the autism risk gene CTCF in neural differentiation-dependent chromatin organization

    Funded Work
    Autism spectrum disorder (ASD) is a complex neurodevelopmental condition characterized by a wide range of cognitive and behavioral alterations.
  8. Reactivating FMR1 to treat fragile X syndrome

    Funded Work
    Fragile X syndrome (FXS) is an X-linked neurodevelopmental condition and one of the most common monogenic causes of inherited intellectual disability and autism spectrum disorder (ASD).
  9. Assessing the role of the autism risk gene Gigyf1 in astrocytic regulation of postnatal brain development in mice

    Funded Work
    Autism spectrum disorder (ASD) is a neurodevelopmental condition characterized by impaired social communication and repetitive behavior.
  10. Piloting gene- and mutation-specific antisense oligonucleotide therapies for autism

    Funded Work
    Antisense oligonucleotides (ASOs) demonstrate promise as therapeutic approaches for treating genetic disorders of the central nervous system, as exemplified by the clinical success of nusinersen (a splice-modulating …
  11. Probing thalamo-cortico-amygdala network differences underlying sensory integration alterations in mouse models of autism

    Funded Work
    Although much research on autism spectrum disorder (ASD) is focused on social and cognitive behaviors, recent evidence has highlighted sensory processing as a key alteration in ASD.
  12. Uncovering developmental activity biomarkers underlying autism using functional imaging in mice

    Funded Work
    Signs of autism emerge as early as 6 to 12 months of age, but the average age of diagnosis in the United States is four years.
  13. Identifying the epigenetic vulnerability of neurodevelopment

    Funded Work
    Haploinsufficiency of select chromatin regulators is frequently associated with autism.
  14. Oligodendrocyte dysfunction in mouse models of autism

    Funded Work
    Decades of research have documented abnormal white matter integrity1–4 and reduced axonal conduction velocities5, 6 in people with idiopathic and syndromic autism spectrum disorder (ASD).
  15. Cell-specific phosphoproteomic profiling in a mouse model of autism linked to a dysregulated kinase

    Funded Work
    Many kinases have been linked to monogenic subtypes of autism spectrum disorder (ASD), but their role in the mechanisms underlying disease etiology is not well understood.
  16. Retrospective longitudinal characterization of gene expression changes in mouse models of autism

    Funded Work
    A large subset of genes associated with autism are transcription factors or epigenetic regulators whose disruption causes broad dysregulation of gene expression during all stages of brain development.
  17. Harnessing functional variant analysis for the targeted design of inhibitors of UBE3A

    Funded Work
    UBE3A is an imprinted gene that encodes an E3 ubiquitin ligase (also known as UBE3A) associated with two developmental disorders.
  18. Putting genes associated with autism in their neurobiological context by transcriptomic and proteomic analyses

    Funded Work
    Individuals with autism spectrum disorder (ASD) process information differently from neurotypical individuals.
  19. Determining how rare and common variants interact and contribute to risk for autism

    Funded Work
    The genetic architecture of autism spectrum disorder (ASD) includes rare protein-truncating variants with large effect sizes as well as common variation conferring much smaller effect sizes.
  20. Neural circuits of frustration and aggression

    Funded Work
    Aggression is the most common reason for hospitalization in children with autism spectrum disorder (ASD).
  21. Restoration of KCC2 expression as a potential therapeutic avenue to treat autism spectrum disorder

    Funded Work
    The current proposal entails a series of significant conceptual and technological advances.
  22. What is the common factor driving brain overgrowth in autism? Investigating the relationship between epigenetic marks and neural stem cell proliferation

    Funded Work
    In this project, Michael Piper and colleagues plan to analyze how H3K36 methylation impacts neural stem cell development and subsequent brain function, using transgenic mouse models lacking the …
  23. Charting the emergence of excitatory and inhibitory neuronal lineages in organoid models of autism

    Funded Work
    Disruption of cortical excitatory and inhibitory neuron development has been implicated in autism spectrum disorder (ASD) by postmortem brain analyses and ASD risk genes.
  24. Triangulation of missense variant impact through multimodal modeling and functional assays

    Funded Work
    Missense variants are the most abundant type of protein-altering variants in coding regions in the genome.
  25. Cell village-based detection of shared molecular and cellular defects across autism risk factors

    Funded Work
    Genetics play a prominent role in autism, as nearly 1,000 genes have been nominated as contributors in the form of point mutations, single gene deletions and chromosomal …
  26. 16p11.2 copy number variant effects on transcriptome-metabolome coupling

    Funded Work
    Copy number variations (CNVs) of the human 16p11.2 genetic locus are associated with a number of neurodevelopmental and psychiatric conditions.
  27. Early life sleep disruption as a risk factor for autism

    Funded Work
    Chronic sleep disruption is a major comorbidity seen in more than 80 percent of children with autism spectrum disorder (ASD).
  28. Neural basis of social decision-making in autism mouse models

    Funded Work
    Autism spectrum disorders (ASD) are characterized by difficulties in social decision-making, posing a significant challenge for individuals with ASD.
  29. Improving the prediction of nonsense-mediated decay outcomes for protein-truncating variants associated with autism

    Funded Work
    The primary goal of human genetics is to understand the relationship between DNA sequence variation and disease.
  30. Mechanisms of disrupted cortical functional connectivity in a mouse model of CDKL5 deficiency disorder

    Funded Work
    Individuals with X-linked CDKL5 deficiency disorder (CDD) exhibit many features common to autism spectrum disorder (ASD), including increased risk of seizures, cognitive impairment and altered sensory sensitivity.
  31. Understanding oral texture feeding issues in mouse models of autism

    Funded Work
    While autism spectrum disorder (ASD) is highly heterogeneous in etiology and severity, the majority of autistic individuals exhibit an array of co-morbid symptoms, including aberrant reactivity to …
  32. Does ectopic expression of germline genes during brain development contribute to autism?

    Funded Work
    Mutations in chromatin regulators have emerged as a major cause of autism spectrum disorder (ASD).
  33. Developing a closed-loop framework using artificial neural networks and nonhuman primate experiments to test theories of atypical facial emotion processing in autism

    Funded Work
    Recognizing others’ moods, emotions and intentions from facial expressions lies at the core of human interpersonal communication and social engagement.
  34. Orchestration of synaptic gene regulation by H3K27me3-dependent modulation of chromatin architecture

    Funded Work
    Chromatin-regulatory genes are among the most common classes of genes mutated in autism spectrum disorder (ASD) and intellectual disability (ID).
  35. Reversing sleep and memory deficits in a mouse model of 16p11.2 deletion syndrome

    Funded Work
    About two-thirds of children with autism spectrum disorder (ASD) experience severe sleep disturbances.
  36. Linking mitochondrial metabolism and autism during human neuronal development

    Funded Work
    Most forms of autism spectrum disorder (ASD) are thought to be caused by disruptions in molecular processes involved in gene regulation or synaptic function.
  37. The role of BAF subunit genetic variants in autism

    Funded Work
    Genetic variants in chromatin remodeling complexes are one of the most frequently attributed genetic causes of autism spectrum disorder (ASD) and intellectual disability (ID).
  38. From proteins to circuits: Understanding thalamocortical circuit vulnerability in autism

    Funded Work
    Atypical sensory perception is highly prevalent in individuals with autism spectrum disorder (ASD).
  39. SINEUP RNAs: a new platform for treating haploinsufficiency in autism

    Funded Work
    Autism spectrum disorder (ASD) is a highly heterogeneous condition with a complex genetic basis.
  40. Understanding epigenetic contributions to autism

    Funded Work
    Among the highly penetrant risk genes for autism spectrum disorder (ASD), many of them encode synaptic proteins and chromatin regulators.
  41. Mitochondrial dysfunction as a genetic modifier in autism

    Funded Work
    Relative to the whole body, the brain uses 10 times more energy by weight.
  42. Assessing prefrontal-hypothalamic circuit control of pro-social behaviors in autism mouse models

    Funded Work
    For social animals and humans to thrive, they must exhibit social competence, a key component of which is adjusting behavior based on social history.
  43. Using network mapping to identify neuromodulation targets for agitation and aggression in autism

    Funded Work
    Many individuals with autism spectrum disorder (ASD) experience persistent agitation or aggression, which has an enormous impact on their and their families’ quality of life.
  44. Mechanisms of chromatin regulation in autism

    Funded Work
    Several transcriptional regulator genes are strongly associated with an increased risk of autism spectrum disorder (ASD).
  45. Connecting autism risk genes to circuits: Multi-level characterization of the cortical subplate

    Funded Work
    Functional genomic studies have identified a convergence of autism risk factors during mid-fetal cerebral cortical development1-2, a crucial period for the assembly for cortical circuits.
  46. Assessing mRNA translation dysregulation in Gigyf1/2 mouse models of autism

    Funded Work
    Brain development and function require adaptive control of protein synthesis (mRNA translation), which is often disrupted in autism spectrum disorder (ASD).
  47. High-throughput precision gene editing and multi-omics profiling of patient-specific CHD8 variants in human-derived stem cells and induced neurons

    Funded Work
    The tremendous genotypic and phenotypic diversity underlying autism spectrum disorder (ASD) has made it extremely challenging to pinpoint causal mechanisms, distinguish the effects of individual genetic variants, stratify …
  48. Uncovering phenotypic convergence across high-risk autism genes using forebrain assembloids

    Funded Work
    Rare and high-penetrance mutations are key contributors to the risk of autism spectrum disorder (ASD).
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