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Bringing people and ideas together to fund, conduct, and share transformative science.

Our grants advance knowledge and strengthen connections between science and society.

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Founded by Jim and Marilyn Simons, we’re a private philanthropy advancing mathematics and basic science.

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Funded Work

Our funded projects advance discovery across mathematics, the physical and life sciences, neuroscience, and autism.

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  1. SCOPE Synthesis: Cyanophage communities and their impacts on ecological processes in the North Pacific Ocean

    Funded Work
  2. SCOPE Synthesis: The impact of micronutrients on microbial community structure in the North Pacific Ocean

    Funded Work
  3. SCOPE Synthesis: Trace metal biogeochemistry of the North Pacific Subtropical Gyre

    Funded Work
  4. SCOPE Synthesis: vDarwin Initiative

    Funded Work
  5. Elucidating the function of the autism risk gene CTCF in neural differentiation-dependent chromatin organization

    Funded Work
    Autism spectrum disorder (ASD) is a complex neurodevelopmental condition characterized by a wide range of cognitive and behavioral alterations.
  6. Reactivating FMR1 to treat fragile X syndrome

    Funded Work
    Fragile X syndrome (FXS) is an X-linked neurodevelopmental condition and one of the most common monogenic causes of inherited intellectual disability and autism spectrum disorder (ASD).
  7. Assessing the role of the autism risk gene Gigyf1 in astrocytic regulation of postnatal brain development in mice

    Funded Work
    Autism spectrum disorder (ASD) is a neurodevelopmental condition characterized by impaired social communication and repetitive behavior.
  8. Piloting gene- and mutation-specific antisense oligonucleotide therapies for autism

    Funded Work
    Antisense oligonucleotides (ASOs) demonstrate promise as therapeutic approaches for treating genetic disorders of the central nervous system, as exemplified by the clinical success of nusinersen (a splice-modulating …
  9. Probing thalamo-cortico-amygdala network differences underlying sensory integration alterations in mouse models of autism

    Funded Work
    Although much research on autism spectrum disorder (ASD) is focused on social and cognitive behaviors, recent evidence has highlighted sensory processing as a key alteration in ASD.
  10. Uncovering developmental activity biomarkers underlying autism using functional imaging in mice

    Funded Work
    Signs of autism emerge as early as 6 to 12 months of age, but the average age of diagnosis in the United States is four years.
  11. Identifying the epigenetic vulnerability of neurodevelopment

    Funded Work
    Haploinsufficiency of select chromatin regulators is frequently associated with autism.
  12. Oligodendrocyte dysfunction in mouse models of autism

    Funded Work
    Decades of research have documented abnormal white matter integrity1–4 and reduced axonal conduction velocities5, 6 in people with idiopathic and syndromic autism spectrum disorder (ASD).
  13. Cell-specific phosphoproteomic profiling in a mouse model of autism linked to a dysregulated kinase

    Funded Work
    Many kinases have been linked to monogenic subtypes of autism spectrum disorder (ASD), but their role in the mechanisms underlying disease etiology is not well understood.
  14. Retrospective longitudinal characterization of gene expression changes in mouse models of autism

    Funded Work
    A large subset of genes associated with autism are transcription factors or epigenetic regulators whose disruption causes broad dysregulation of gene expression during all stages of brain development.
  15. Harnessing functional variant analysis for the targeted design of inhibitors of UBE3A

    Funded Work
    UBE3A is an imprinted gene that encodes an E3 ubiquitin ligase (also known as UBE3A) associated with two developmental disorders.
  16. Analysis of lateral gene transfer rates

    Funded Work
  17. Putting genes associated with autism in their neurobiological context by transcriptomic and proteomic analyses

    Funded Work
    Individuals with autism spectrum disorder (ASD) process information differently from neurotypical individuals.
  18. Determining how rare and common variants interact and contribute to risk for autism

    Funded Work
    The genetic architecture of autism spectrum disorder (ASD) includes rare protein-truncating variants with large effect sizes as well as common variation conferring much smaller effect sizes.
  19. Neural circuits of frustration and aggression

    Funded Work
    Aggression is the most common reason for hospitalization in children with autism spectrum disorder (ASD).
  20. Restoration of KCC2 expression as a potential therapeutic avenue to treat autism spectrum disorder

    Funded Work
    The current proposal entails a series of significant conceptual and technological advances.
  21. What is the common factor driving brain overgrowth in autism? Investigating the relationship between epigenetic marks and neural stem cell proliferation

    Funded Work
    In this project, Michael Piper and colleagues plan to analyze how H3K36 methylation impacts neural stem cell development and subsequent brain function, using transgenic mouse models lacking the …
  22. Charting the emergence of excitatory and inhibitory neuronal lineages in organoid models of autism

    Funded Work
    Disruption of cortical excitatory and inhibitory neuron development has been implicated in autism spectrum disorder (ASD) by postmortem brain analyses and ASD risk genes.
  23. Triangulation of missense variant impact through multimodal modeling and functional assays

    Funded Work
    Missense variants are the most abundant type of protein-altering variants in coding regions in the genome.
  24. Cell village-based detection of shared molecular and cellular defects across autism risk factors

    Funded Work
    Genetics play a prominent role in autism, as nearly 1,000 genes have been nominated as contributors in the form of point mutations, single gene deletions and chromosomal …
  25. 16p11.2 copy number variant effects on transcriptome-metabolome coupling

    Funded Work
    Copy number variations (CNVs) of the human 16p11.2 genetic locus are associated with a number of neurodevelopmental and psychiatric conditions.
  26. Early life sleep disruption as a risk factor for autism

    Funded Work
    Chronic sleep disruption is a major comorbidity seen in more than 80 percent of children with autism spectrum disorder (ASD).
  27. Neural basis of social decision-making in autism mouse models

    Funded Work
    Autism spectrum disorders (ASD) are characterized by difficulties in social decision-making, posing a significant challenge for individuals with ASD.
  28. Improving the prediction of nonsense-mediated decay outcomes for protein-truncating variants associated with autism

    Funded Work
    The primary goal of human genetics is to understand the relationship between DNA sequence variation and disease.
  29. Mechanisms of disrupted cortical functional connectivity in a mouse model of CDKL5 deficiency disorder

    Funded Work
    Individuals with X-linked CDKL5 deficiency disorder (CDD) exhibit many features common to autism spectrum disorder (ASD), including increased risk of seizures, cognitive impairment and altered sensory sensitivity.
  30. Understanding oral texture feeding issues in mouse models of autism

    Funded Work
    While autism spectrum disorder (ASD) is highly heterogeneous in etiology and severity, the majority of autistic individuals exhibit an array of co-morbid symptoms, including aberrant reactivity to …
  31. Does ectopic expression of germline genes during brain development contribute to autism?

    Funded Work
    Mutations in chromatin regulators have emerged as a major cause of autism spectrum disorder (ASD).
  32. Developing a closed-loop framework using artificial neural networks and nonhuman primate experiments to test theories of atypical facial emotion processing in autism

    Funded Work
    Recognizing others’ moods, emotions and intentions from facial expressions lies at the core of human interpersonal communication and social engagement.
  33. Orchestration of synaptic gene regulation by H3K27me3-dependent modulation of chromatin architecture

    Funded Work
    Chromatin-regulatory genes are among the most common classes of genes mutated in autism spectrum disorder (ASD) and intellectual disability (ID).
  34. Reversing sleep and memory deficits in a mouse model of 16p11.2 deletion syndrome

    Funded Work
    About two-thirds of children with autism spectrum disorder (ASD) experience severe sleep disturbances.
  35. Linking mitochondrial metabolism and autism during human neuronal development

    Funded Work
    Most forms of autism spectrum disorder (ASD) are thought to be caused by disruptions in molecular processes involved in gene regulation or synaptic function.
  36. The role of BAF subunit genetic variants in autism

    Funded Work
    Genetic variants in chromatin remodeling complexes are one of the most frequently attributed genetic causes of autism spectrum disorder (ASD) and intellectual disability (ID).
  37. From proteins to circuits: Understanding thalamocortical circuit vulnerability in autism

    Funded Work
    Atypical sensory perception is highly prevalent in individuals with autism spectrum disorder (ASD).
  38. SINEUP RNAs: a new platform for treating haploinsufficiency in autism

    Funded Work
    Autism spectrum disorder (ASD) is a highly heterogeneous condition with a complex genetic basis.
  39. Understanding epigenetic contributions to autism

    Funded Work
    Among the highly penetrant risk genes for autism spectrum disorder (ASD), many of them encode synaptic proteins and chromatin regulators.
  40. Mitochondrial dysfunction as a genetic modifier in autism

    Funded Work
    Relative to the whole body, the brain uses 10 times more energy by weight.
  41. Assessing prefrontal-hypothalamic circuit control of pro-social behaviors in autism mouse models

    Funded Work
    For social animals and humans to thrive, they must exhibit social competence, a key component of which is adjusting behavior based on social history.
  42. Using network mapping to identify neuromodulation targets for agitation and aggression in autism

    Funded Work
    Many individuals with autism spectrum disorder (ASD) experience persistent agitation or aggression, which has an enormous impact on their and their families’ quality of life.
  43. Mechanisms of chromatin regulation in autism

    Funded Work
    Several transcriptional regulator genes are strongly associated with an increased risk of autism spectrum disorder (ASD).
  44. Connecting autism risk genes to circuits: Multi-level characterization of the cortical subplate

    Funded Work
    Functional genomic studies have identified a convergence of autism risk factors during mid-fetal cerebral cortical development1-2, a crucial period for the assembly for cortical circuits.
  45. Modeling Atmospheric Turbulence and Its Impacts on Plume Dispersion for Stratospheric Aerosol Injection

    Funded Work
    The concept behind stratospheric aerosol injection (SAI) is to inject aerosols or their precursors into the stratosphere, likely using aircraft, to increase the reflection of incoming sunlight back …
  46. Post-2020 Changes in Shipping Emissions: Impact on Aerosol-Driven Changes in the Direct and Indirect Forcing of Climate

    Funded Work
    A major discussion and ongoing concern in the climate science community is to what extent the post-2020 acceleration in global mean surface temperatures reflects simple internal climate …
  47. Mitigating Global Warming by Weakening the CO2 Greenhouse Effect

    Funded Work
    The team will explore the extent to which greenhouse gas-induced global warming and associated regional climate impacts could be offset by a novel solar radiation management (SRM …
  48. Stratospheric Aerosol Injection with Alternative Materials: Modeling of the Feasibility and Impacts Using the NCAR Community Earth System Model (CESM)

    Funded Work
    Stratospheric aerosol intervention (SAI) has been proposed in addition to ambitious mitigation to increase the planet’s reflectivity to counter some of the impacts of climate change until …
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