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Bringing people and ideas together to fund, conduct, and share transformative science.

Our grants advance knowledge and strengthen connections between science and society.

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Founded by Jim and Marilyn Simons, we’re a private philanthropy advancing mathematics and basic science.

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Featured

Dissecting mechanisms of hyperarousal in autism and related disorders using the Simons Sleep Project

Funded Work

Gravity Follows Newton’s and Einstein’s Rules, Even at Cosmic Scales

April 15, 2026

Scientists Capture Superconductivity’s ‘Dancing Pairs’ for First Time, Filling Gap in Decades-Old Theory

April 15, 2026

How SURFiN Fellowships Jump-Started These 3 Neuroscience Students’ STEM Careers

March 18, 2026

Results

  1. A Causal Network Analysis of Neuromodulation in the Mood Processing Network

    Publication
    Neural decoding and neuromodulation technologies hold great promise for treating mood and other brain disorders in next-generation therapies that manipulate functional brain networks. Here we perform a …
  2. Measuring robustness of brain networks in autism spectrum disorder with Ricci curvature.

    Publication
  3. Structure and flexibility in cortical representations of odour space

    Publication
    The cortex organizes sensory information to enable discrimination and generalization1-4. As systematic representations of chemical odour space have not yet been described in the olfactory cortex, it …
  4. Physiological blood-brain transport is impaired with age by a shift in transcytosis

    Publication
    The vascular interface of the brain, known as the blood-brain barrier (BBB), is understood to maintain brain function in part via its low transcellular permeability1-3. Yet …
  5. Force-Induced Formation of Twisted Chiral Ribbons

    Publication
    We demonstrate that an achiral stretching force transforms disk-shaped colloidal membranes composed of chiral rods into twisted ribbons with handedness opposite the preferred twist of the rods …
  6. Neurons as Canonical Correlation Analyzers

    Publication
    Normative models of neural computation offer simplified yet lucid mathematical descriptions of murky biological phenomena. Previously, online Principal Component Analysis (PCA) was used to model a network of …
  7. Reciprocal influences between parent input and child language skills in dyads involving high- and low-risk infants for autism spectrum disorder.

    Publication
  8. The role of somatic mosaicism in brain disease.

    Publication
  9. Homeostatic plasticity fails at the intersection of autism-gene mutations and a novel class of common genetic modifiers.

    Publication
  10. Kalirin and Trio: RhoGEFs in synaptic transmission, plasticity, and complex brain disorders.

    Publication
  11. Does the factor structure of IQ differ between the differential ability scales (DAS-II) normative sample and autistic children?

    Publication
  12. Gesture development, caregiver responsiveness, and language and diagnostic outcomes in infants at high and low risk for autism.

    Publication
  13. Genomic analyses implicate noncoding de novo variants in congenital heart disease

    Publication
    A genetic etiology is identified for one-third of patients with congenital heart disease (CHD), with 8% of cases attributable to coding de novo variants (DNVs). To assess …
  14. A selective inference approach for false discovery rate control using multiomics covariates yields insights into disease risk.

    Publication
  15. Complete Connectomic Reconstruction of Olfactory Projection Neurons in the Fly Brain

    Publication
    Nervous systems contain sensory neurons, local neurons, projection neurons, and motor neurons. To understand how these building blocks form whole circuits, we must distil these broad classes into …
  16. BRICseq Bridges Brain-wide Interregional Connectivity to Neural Activity and Gene Expression in Single Animals.

    Publication
    Comprehensive analysis of neuronal networks requires brain-wide measurement of connectivity, activity, and gene expression. Although high-throughput methods are available for mapping brain-wide activity and transcriptomes …
  17. SU(3)_1 Chiral Spin Liquid on the Square Lattice: a View from Symmetric PEPS

    Publication
    Quantum spin liquids can be faithfully represented and efficiently characterized within the framework of Projected Entangled Pair States (PEPS). Guided by extensive exact diagonalization and density matrix renormalization …
  18. The Striatum Organizes 3D Behavior via Moment-to-Moment Action Selection

    Publication
    Many naturalistic behaviors are built from modular components that are expressed sequentially. Although striatal circuits have been implicated in action selection and implementation, the neural mechanisms that compose …
  19. Low-Photon Holographie Phase Retrieval

    Publication
    A novel optimization formulation is provided for holographic phase retrieval with data subjected to Poisson shot noise in the low-photon regime. This formulation, based on regularized maximum …
  20. Precision Calcium Imaging of Dense Neural Populations via a Cell-Body-Targeted Calcium Indicator

    Publication
    Methods for one-photon fluorescent imaging of calcium dynamics can capture the activity of hundreds of neurons across large fields of view at a low equipment complexity and …
  21. Flexible recruitment of memory-based choice representations by the human medial frontal cortex

    Publication
    Decision-making in complex environments relies on flexibly using prior experience. This process depends on the medial frontal cortex (MFC) and the medial temporal lobe, but it remains …
  22. Input Connectivity Reveals Additional Heterogeneity of Dopaminergic Reinforcement in Drosophila

    Publication
    Different types of Drosophila dopaminergic neurons (DANs) reinforce memories of unique valence and provide state-dependent motivational control [1]. Prior studies suggest that the compartment architecture of the …
  23. A planet within the debris disk around the pre-main-sequence star AU Microscopii

    Publication
    AU Microscopii (AU Mic) is the second closest pre main sequence star, at a distance of 9.79 parsecs and with an age of 22 million years. AU …
  24. Anatomy and Function of the Primate Entorhinal Cortex

    Publication
    The entorhinal cortex (EC) is a critical element of the hippocampal formation located within the medial temporal lobe (MTL) in primates. The EC has historically received attention for …
  25. Neuronal inactivity co-opts LTP machinery to drive potassium channel splicing and homeostatic spike widening.

    Publication
  26. High-Resolution Longitudinal Dynamics of the Cystic Fibrosis Sputum Microbiome and Metabolome through Antibiotic Therapy

    Publication
    Microbial diversity in the cystic fibrosis (CF) lung decreases over decades as pathogenic bacteria such as Pseudomonas aeruginosa take over. The dynamics of the CF microbiome and metabolome …
  27. Combined model-free and model-sensitive reinforcement learning in non-human primates

    Publication
    Contemporary reinforcement learning (RL) theory suggests that potential choices can be evaluated by strategies that may or may not be sensitive to the computational structure of tasks. A …
  28. Parallel RNA and DNA analysis after deep-sequencing (PRDD-seq) reveals cell type specific lineage patterns in human brain.

    Publication
  29. Representation, abstraction, and simple-minded sophisticates

    Publication
    Bayesian decision theory provides a simple formal elucidation of some of the ways that representation and representational abstraction are involved with, and exploit, both prediction and its rather …
  30. Cortical neurons derived from human pluripotent stem cells lacking FMRP display altered spontaneous firing patterns.

    Publication
  31. Co-movement of astral microtubules, organelles, and F-actin suggests aster positioning by surface forces in frog eggs

    Publication
    How bulk cytoplasm generates forces to separate post-anaphase microtubule (MT) asters in Xenopus laevis and other large eggs remains unclear. Previous models proposed dynein-based organelle transport …
  32. Many-body Electronic Structure of NdNiO2 and CaCuO2

    Publication
    The demonstration of superconductivity in nickelate analogues of high Tc cuprates provides new perspectives on the physics of correlated electron materials. The degree to which the nickelate electronic …
  33. Precise measurement of quantum observables with neural-network estimators

    Publication
    The measurement precision of modern quantum simulators is intrinsically constrained by the limited set of measurements that can be efficiently implemented on hardware. This fundamental limitation is particularly …
  34. Dissecting autism genetic risk using single-cell RNA-seq data.

    Publication
  35. Social attention: What is it, how can we measure it, and what can it tell us about autism and ADHD?

    Publication
  36. Flexible coding of object motion in multiple reference frames by parietal cortex neurons

    Publication
    Neurons represent spatial information in diverse reference frames, but it remains unclear whether neural reference frames change with task demands and whether these changes can account for behavior …
  37. GABA A Rα2 is decreased in the axon initial segment of pyramidal cells in specific areas of the prefrontal cortex in autism.

    Publication
  38. Reduced sleep pressure in young children with autism.

    Publication
  39. De novo damaging DNA coding mutations are associated with obsessive-compulsive disorder and overlap with Tourette’s disorder and autism.

    Publication
  40. Beyond Gaia: Asteroseismic Distances of M Giants Using Ground-based Transient Surveys

    Publication
    Evolved stars near the tip of the red giant branch (TRGB) show solar-like oscillations with periods spanning hours to months and amplitudes ranging from ∼1 mmag to …
  41. Specific viral RNA drives the SARS CoV-2 nucleocapsid to phase separate

    Publication
    A mechanistic understanding of the SARS-CoV-2 viral replication cycle is essential to develop new therapies for the COVID-19 global health crisis. In this study, we …
  42. Structure-Based Protein Function Prediction using Graph Convolutional Networks

    Publication
    The large number of available sequences and the diversity of protein functions challenge current experimental and computational approaches to determining and predicting protein function. We present a deep …
  43. Microexons: At the nexus of nervous system development, behaviour and autism spectrum disorder.

    Publication
  44. Distinct signals in medial and lateral VTA dopamine neurons modulate fear extinction at different times

    Publication
    Dopamine (DA) neurons are to encode reward prediction error (RPE), in addition to other signals, such as salience. While RPE is known to support learning, the role of …
  45. A Distributed Neural Code in the Dentate Gyrus and in CA1

    Publication
    Neurons are often considered specialized functional units that encode a single variable. However, many neurons are observed to respond to a mix of disparate sensory, cognitive, and behavioral …
  46. Lorentz Group Equivariant Neural Network for Particle Physics

    Publication
    We present a neural network architecture that is fully equivariant with respect to transformations under the Lorentz group, a fundamental symmetry of space and time in physics. The …
  47. Neural Trajectories in the Supplementary Motor Area and Motor Cortex Exhibit Distinct Geometries, Compatible with Different Classes of Computation.

    Publication
    The supplementary motor area (SMA) is believed to contribute to higher order aspects of motor control. We considered a key higher order role: tracking progress throughout an action …
  48. Mutational bias and the protein code shape the evolution of splicing enhancers.

    Publication
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