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Simons Foundation
Simons Foundation

Autism Research Initiative (SFARI)

  • Funding

    Explore open funding opportunities for autism research.

    Funding Opportunities

    Early Career Awards

    • Fellows to Faculty Award
    • Shenoy Undergraduate Research Fellowship in Neuroscience (SURFiN)

    Investigator Awards

    • New Ideas

    Symposia & Travel Awards

    • Conferences & Courses Award

    Shared Programs

    • Pivot Fellowship
    • Simons Society of Fellows

    Resource for Applying

    • Open Funding Opportunities
    • Policies & Procedures
    • Instructional Videos
    • Past Funded Work
  • Supported Work

    SFARI has supported over 750 investigators studying autism-related research.

    Research Highlights

    Research

    • SFARI Investigators
    • Funded Projects
    • Publications

    Data Access & Tools

    • SFARI Base
    • SFARI Gene

    Centers & Initiatives

    • Simons Center for the Social Brain
    • Simons Initiative for the Developing Brain

    Collaborations & Consortia

    • SFARI Sex Differences
    • Autism Rat Models Consortium
  • Resources

    Access data, biospecimens and participant cohorts through SFARI Base.

    SFARI Base

    Cohorts & Tissue Banks

    • SPARK
    • Simons Searchlight
    • Simons Simplex Collection
    • Autism BrainNet
    • Autism Inpatient Collection

    Other Resources

    • Animal Models
    • Biospecimens
    • Research Match

    Data Access & Tools

    • SFARI Base
    • SFARI Gene
    • SFARI Genomes Browser
    • Genotypes & Phenotypes in Families
  • News

    See the latest news and updates from SFARI.

    All News

    News

    • SFARI News
    • Research Highlights
    • Meeting & Workshop Reports
    • Funding News
  • About

    SFARI’s mission is to advance the basic science of autism and related neurodevelopmental disorders.

    About SFARI

    About SFARI

    • About
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Autism Research Initiative (SFARI) Autism Rat Models Consortium

Autism Rat Models Consortium: Publications

From ARC

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Results

  1. Bias in measurement of autism symptoms by spoken language level and non-verbal mental age in minimally verbal children with neurodevelopmental disorders.

    Front. Psychol., July 29, 2022

    Zheng S., Kaat A., Farmer C., Thurm A., Burrows C.A., S. Kanne, et al.

  2. Analysis of somatic mutations in 131 human brains reveals aging-associated hypermutability.

    Science, July 29, 2022

    Bae T., Fasching L., Wang Y., Shin J.H., Suvakov M., Jang Y., Norton S., Dias C., Mariani J., Jourdon A., Wu F., Panda A., Pattni R., Chahine Y., Yeh R., Roberts R.C., Huttner A., Kleinman J.E., Hyde T.M., Straub R.E., C. Walsh, Brain Somatic Mosaicism Network§, Urban A.E., Leckman J.F., Weinberger D.R., F. Vaccarino, and A. Abyzov

  3. Deep embedded clustering by relevant scales and genome-wide association study in autism.

    bioRxiv, July 25, 2022

    Ueno F., Onuma T., Takahashi I., Ohseto H., Narita A., Obara T., et al.

  4. Psychometric validation of a brief self-report measure of misophonia symptoms and functional impairment: The duke-vanderbilt misophonia screening questionnaire.

    Front. Psychol., July 22, 2022

    Williams Z.J., Cascio C.J., and Woynaroski T.G.

  5. Psychometric validation of a brief self-report measure of misophonia symptoms and functional impairment: The duke-vanderbilt misophonia screening questionnaire.

    Front. Psychology, July 22, 2022

    Williams Z.J., Cascio C.J., and Woynaroski T.G.

  6. Synaptic hyperexcitability of cytomegalic pyramidal neurons contributes to epileptogenesis in tuberous sclerosis complex.

    Cell Rep., July 19, 2022

    Wu X., Sosunov A.A., Lado W., Teoh J.J., Ham A., Li H., et al.

  7. Polygenic architecture of rare coding variation across 400,000 exomes.

    medRxiv, July 19, 2022

    Weiner D.J., Nadig A., Jagadeesh K.A., Dey K.K., Neale B.M., E. Robinson, et al.

  8. Epilepsy-related CDKL5 deficiency slows synaptic vesicle endocytosis in central nerve terminals.

    bioRxiv, July 19, 2022

    Kontaxi C., Davenport E.C., P. Kind, and Cousin M.A.

  9. Imbalance of flight-freeze responses and their cellular correlates in the Nlgn3−/y rat model of autism.

    Mol. Autism, July 18, 2022

    Anstey N.J., Kapgal V., Tiwari S., Watson T.C., Toft A.K.H., Dando O.R., et al.

  10. Abnormal whisker-dependent behaviors and altered cortico-hippocampal connectivity in Shank3b-/- mice.

    Cereb Cortex, July 12, 2022

    Balasco L., Pagani M., Pangrazzi L., Chelini G., Ciancone Chama A.G., Shlosman E., et al.

  11. Human iPSC-derived neuron of 16p11.2 deletion reveals haplotype-specific expression of MAPK3 and its contribution to variable NDD phenotypes.

    bioRxiv, July 11, 2022

    Liu F., Liang C., Li Z., Zhao S., Shangguan S., Yuan H., et al.

  12. Copy number variation at the 22q11.2 locus influences prevalence, severity, and psychiatric impact of sleep disturbance.

    J. Neurodev. Disord., July 10, 2022

    O'Hora K.P., Lin A., Kushan-Wells L., and C. Bearden

  13. Heterogeneity of resting-state EEG features in juvenile myoclonic epilepsy and controls.

    Brain Commun., July 8, 2022

    Shakeshaft A., Laiou P., Abela E., Stavropoulos I., Richardson M.P., Pal D.K., et al.

  14. The longitudinal bidirectional relationship between autistic traits and brain morphology from childhood to adolescence: A population-based cohort study.

    Mol. Autism, July 5, 2022

    Durkut M., Blok E., Suleri A., and T. White

  15. Integrative analysis prioritised oxytocin-related biomarkers associated with the aetiology of autism spectrum disorder.

    EBioMedicine, July 1, 2022

    Wang T., Zhao T., Liu L., Teng H., Fan T., Li Y., et al.

  16. Telehealth diagnosis of autism spectrum disorder through clinical cases.

    Clin. Neuropsychol., July 1, 2022

    Ludwig N.N., Child A.E., Jashar D.T., Mostow A.J., and E. Wodka

  17. Association of mitochondrial DNA content, heteroplasmies and inter-generational transmission with autism.

    Nat. Commun., July 1, 2022

    Wang Y., Guo X., Hong X., Wang G., Pearson C., Zuckerman B., et al.

  18. Characterization of phenotypic range in DYRK1A haploinsufficiency syndrome using standardized behavioral measures.

    Am. J. Med. Genet. A., July 1, 2022

    Fenster R., Ziegler A., Kentros C., Geltzeiler A., L. Green Snyder, L. Brooks, et al.

  19. Age-related central gain with degraded neural synchrony in the auditory brainstem of mice and humans.

    Neurobiol. Aging, July 1, 2022

    Rumschlag J.A., McClaskey C.M., Dias J.W., Kerouac L.B., Noble K.V., Panganiban C., et al.

  20. Controlling for spurious nonlinear dependence in connectivity analyses.

    Neuroinformatics, July 1, 2022

    Poskanzer C., Fang M., Aglinskas A., and S. Anzellotti

  21. Subgrouping school-aged children with autism spectrum disorder based on co-occurring psychopathology.

    Res. Autism Specr. Disord., July 1, 2022

    Piergies A.M.H., Hirota T., Monden R., and Zheng S.

  22. Co-occurring attention-deficit/hyperactivity disorder and anxiety disorders differentially affect males and females with autism.

    Clin. Neuropsychol., July 1, 2022

    E. Wodka, Parish-Morris J., R. Annett, L. Carpenter, Dillon E., J. Michaelson, et al.

  23. The early start Denver model intervention and Mu rhythm attenuation in autism spectrum disorders.

    J. Autism Dev. Disord., July 1, 2022

    Aaronson B., Estes A., Rogers S.J., G. Dawson, and R. Bernier

  24. Integrative single-cell analysis of cardiogenesis identifies developmental trajectories and non-coding mutations in congenital heart disease.

    bioRxiv, June 29, 2022

    Ameen M., Sundaram L., Banerjee A., Shen M., Kundu S., Nair S., et al.

  25. Consistency of parent-report SLC6A1 data in Simons Searchlight with provider-based publications.

    J. Neurodev. Disord., June 28, 2022

    Bain J.M., L. Green Snyder, Helbig K.L., Cooper D.D., W. Chung, and Goodspeed K.

  26. Autism NPCs from both idiopathic and CNV 16p11.2 deletion patients exhibit dysregulation of proliferation and mitogenic responses.

    Stem Cell Reports, June 24, 2022

    Connacher R., Williams M., Prem S., Yeung P.L., Matteson P., Mehta M., et al.

  27. Calculating genetic risk for dysfunction in pleiotropic biological processes using whole exome sequencing data.

    J. Neurodev. Disord., June 24, 2022

    Veatch O.J., Mazzotti D.R., R. Schultz, T. Abel, J. Michaelson, Brodkin E.S., et al.

  28. Fate mapping of neural stem cell niches reveals distinct origins of human cortical astrocytes.

    Science, June 24, 2022

    Allen D.E., Donohue K.C., Cadwell C.R., Shin D., Keefe M.G., V. Sohal, et al.

  29. Biophysical Kv3 channel alterations dampen excitability of cortical PV interneurons and contribute to network hyperexcitability in early Alzheimer's.

    Elife, June 21, 2022

    Oláh V.J., Goettemoeller A.M., Rayaprolu S., Dammer E.B., Seyfried N.T., Rangaraju S., et al.

  30. Opposite expression patterns of Spry3 and p75NTR in cerebellar vermis suggest a male-specific mechanism of autism pathogenesis.

    Front. Psychiatry, June 18, 2022

    Ning Z., Williams J.M., Kumari R., Baranov P.V., and Moore T.

  31. Disrupted computations of social control in individuals with obsessive-compulsive and misophonia symptoms.

    iScience, June 16, 2022

    Banker S.M., Na S., Beltrán J., Koenigsberg H.W., Foss-Feig J.H., Gu X., et al.

  32. SFARI genes and where to find them; modelling autism spectrum disorder specific gene expression dysregulation with RNA-seq data.

    Sci Rep, June 16, 2022

    Arpi M.N.T. and Simpson T.I.

  33. Deficiency of autism-related Scn2a gene in mice disrupts sleep patterns and circadian rhythms.

    Neurobiol Dis., June 15, 2022

    Ma Z., Eaton M., Liu Y., Zhang J., Chen X., Tu X., Shi Y., Que Z., Wettschurack K., Zhang Z., Shi R., Chen Y., Kimbrough A., Lanman N.A., Schust L., Huang Z., Yang Y.

  34. Abnormal sensory perception masks behavioral performance of Grin1 knockdown mice.

    Genes Brain Behav., June 15, 2022

    Lipina T., Men X., Blundell M., Salahpour A., and A. Ramsey

  35. Using child-friendly movie stimuli to study the development of face, place, and object regions from age 3 to 12 years.

    Hum. Brain. Mapp., June 13, 2022

    Kamps F.S., Richardson H., Murty N.A.R., Kanwisher N., and R. Saxe

  36. Video-evoked fMRI BOLD responses are highly consistent across different data acquisition sites.

    Hum. Brain. Mapp., June 13, 2022

    Byrge L., Kliemann D., He Y., Cheng H., and Tyszka J.M.

  37. Clinical autism subscales have common genetic liabilities that are heritable, pleiotropic, and generalizable to the general population.

    Transl. Psychiatry, June 13, 2022

    Thomas T.R., Koomar T., Casten L., Tener A., Bahl E., and J. Michaelson

  38. Orgo-Seq integrates single-cell and bulk transcriptomic data to identify cell type specific-driver genes associated with autism spectrum disorder.

    Nat. Commun., June 10, 2022

    Lim E.T., Chan Y., Dawes P., Guo X., Erdin S., Tai D.J.C., et al.

  39. Excess ribosomal protein production unbalances translation in a model of fragile X syndrome.

    Nat. Commun., June 10, 2022

    Seo S.S., Louros S.R., Anstey N., Gonzalez-Lozano M.A., Harper C.B., Verity N.C., et al.

  40. Association between resting-state functional brain connectivity and gene expression is altered in autism spectrum disorder.

    Nat. Commun., June 9, 2022

    Berto S., Treacher A.H., Caglayan E., Luo D., Haney J.R., M. Gandal, et al.

  41. The female protective effect against autism spectrum disorder.

    Cell Genom., June 8, 2022

    Wigdor E.M., Weiner D.J., Grove J., Fu J., Thompson W.K., Satterstrom F.K., et al.

  42. Creation and evaluation of full-text literature-derived, feature-weighted disease models of genetically determined developmental disorders.

    Database (Oxford), June 7, 2022

    Yates T.M., Lain A., Campbell J., FitzPatrick D.R., and Simpson T.I.

  43. Peripheral auditory nerve impairment in a mouse model of syndromic autism.

    bioRxiv, June 3, 2022

    McChesney N., Barth J.L., Rumschlag J.A., Tan J., Harrington A.J., Noble K.V., et al.

  44. Contrastive machine learning reveals the structure of neuroanatomical variation within autism.

    Science, June 3, 2022

    Aglinskas A., J. Hartshorne, and S. Anzellotti

  45. Ankyrin-B is lipid-modified by S-palmitoylation to promote dendritic membrane scaffolding of voltage-gated sodium channel Nav1.2 in neurons.

    bioRxiv, June 2, 2022

    Gupta J.P. and P. Jenkins

  46. DeepND: Deep multitask learning of gene risk for comorbid neurodevelopmental disorders.

    Patterns (N. Y.), June 2, 2022

    Beyreli I., Karakahya O., and A. E. Çiçek

  47. Spatiotemporal dynamics of noradrenaline during learned behaviour.

    Nature, June 1, 2022

    Breton-Provencher V., Drummond G.T., Feng J., Li Y., and M. Sur

  48. Physical and functional convergence of the autism risk genes Scn2a and Ank2 in neocortical pyramidal cell dendrites.

    bioRxiv, June 1, 2022

    Nelson A.D., Catalfio A.M., Gupta J.M., Min L., Caballero-Florán R.N., Dean K.P., et al.

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