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Simons Foundation
Simons Foundation

Autism Research Initiative (SFARI)

  • Funding

    Explore open funding opportunities for autism research.

    Funding Opportunities

    Early Career Awards

    • Fellows to Faculty Award
    • Shenoy Undergraduate Research Fellowship in Neuroscience (SURFiN)

    Investigator Awards

    • New Ideas

    Symposia & Travel Awards

    • Conferences & Courses Award

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    • Pivot Fellowship
    • Simons Society of Fellows

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    • Policies & Procedures
    • Instructional Videos
    • Past Funded Work
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    SFARI has supported over 750 investigators studying autism-related research.

    Research Highlights

    Research

    • SFARI Investigators
    • Funded Projects
    • Publications

    Data Access & Tools

    • SFARI Base
    • SFARI Gene

    Centers & Initiatives

    • Simons Center for the Social Brain
    • Simons Initiative for the Developing Brain

    Collaborations & Consortia

    • SFARI Sex Differences
    • Autism Rat Models Consortium
  • Resources

    Access data, biospecimens and participant cohorts through SFARI Base.

    SFARI Base

    Cohorts & Tissue Banks

    • SPARK
    • Simons Searchlight
    • Simons Simplex Collection
    • Autism BrainNet
    • Autism Inpatient Collection

    Other Resources

    • Animal Models
    • Biospecimens
    • Research Match

    Data Access & Tools

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    • SFARI Gene
    • SFARI Genomes Browser
    • Genotypes & Phenotypes in Families
  • News

    See the latest news and updates from SFARI.

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    SFARI’s mission is to advance the basic science of autism and related neurodevelopmental disorders.

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Autism Research Initiative (SFARI) Autism Rat Models Consortium

Autism Rat Models Consortium: Publications

From ARC

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Results

  1. Can mouse imaging studies bring order to autism connectivity chaos?

    Front. Neurosci., November 9, 2016

    Liska A. and A. Gozzi

  2. De novo genic mutations among a Chinese autism spectrum disorder cohort.

    Nat. Commun., November 7, 2016

    Wang T., Guo H., Xiong B., H. Stessman, Wu H., Coe B.P., et al.

  3. The central nervous system and the gut microbiome.

    Cell, November 2, 2016

    Sharon G., Sampson T.R., D. Geschwind, and S. Mazmanian

  4. Identification of a RAI1-associated disease network through integration of exome sequencing, transcriptomics, and 3D genomics.

    Genome Med., October 31, 2016

    Loviglio M.N., Beck C.R., White J.J., Leleu M., Harel T., Guex N., et al.

  5. 16p11.2 deletion and duplication: Characterizing neurologic phenotypes in a large clinically ascertained cohort.

    Am. J. Med. Genet. A., October 31, 2016

    Steinman K.J., S. Spence, Ramocki M.B., Proud M.B., Kessler S.K., Marco E.J., et al.

  6. De novo PHIP-predicted deleterious variants are associated with developmental delay, intellectual disability, obesity, and dysmorphic features.

    Cold Spring Harb. Mol. Case Stud., October 31, 2016

    Webster E., Cho M.T., Alexander N., Desai S., Naidu S., Bekheirnia M.R., et al.

  7. Developmental timing and critical windows for the treatment of psychiatric disorders.

    Nat. Med., October 31, 2016

    O. Marín

  8. Genome-wide prediction and functional characterization of the genetic basis of autism spectrum disorder.

    Nat. Neurosci., October 31, 2016

    Krishnan A., Zhang R., Yao V., Theesfeld C.L., Wong A.K., Tadych A., et al.

  9. Multisensory perceptual learning is dependent upon task difficulty.

    Exp. Brain Res., October 31, 2016

    De Niear M.A., Koo B., and M. Wallace

  10. TSHZ3 deletion causes an autism syndrome and defects in cortical projection neurons.

    Nat. Genet., October 31, 2016

    Caubit X., Gubellini P., Andrieux J., Roubertoux P.L., Metwaly M., Jacq B., et al.

  11. Genetic evidence for elevated pathogenicity of mitochondrial DNA heteroplasmy in autism spectrum disorder.

    PLoS Genet, October 27, 2016

    Wang Y., Picard M., and Z. Gu

  12. Early predictors of impaired social functioning in male rhesus macaques (Macaca mulatta).

    PLOS One, October 26, 2016

    Sclafani V., Del Rosso L.A., Seil S.K., Calonder L.A., Madrid J.E., Bone K.J., et al.

  13. MEF2C regulates cortical inhibitory and excitatory synapses and behaviors relevant to neurodevelopmental disorders.

    Elife, October 24, 2016

    Harrington A.J., Raissi A., Rajkovich K., Berto S., Kumar J., Molinaro G., et al.

  14. Molecular and neural functions of RAI1, the causal gene for Smith-Magenis syndrome.

    Neuron, October 18, 2016

    W. Huang, Guenthner C.J., Xu J., Nguyen T., Schwarz L.A., Wilkinson A.W., et al.

  15. Development and psychometric evaluation of the Hansen Research Services Matrix Adaptive Test: A measure of nonverbal IQ.

    J. Autism Dev. Disord., October 12, 2016

    Hansen J.A.

  16. Mutations in human accelerated regions disrupt cognition and social behavior.

    Cell, October 5, 2016

    Doan R.N., Bae B.I., Cubelos B., Chang C., Hossain A.A., Al-Saad S., et al.

  17. Mutations in MBOAT7, encoding lysophosphatidylinositol acyltransferase I, lead to intellectual disability accompanied by epilepsy and autistic features.

    Am. J. Hum. Genet., October 5, 2016

    Johansen A., Rosti R.O., Musaev D., Sticca E., Harripaul R., Zaki M., et al.

  18. A systematic variant annotation approach for ranking genes associated with autism spectrum disorders.

    Mol. Autism, September 30, 2016

    Larsen E., Menashe I., Ziats M.N., Pereanu W., A. Packer, and Banerjee-Basu S.

  19. Thalamic inhibition: Diverse sources, diverse scales.

    Trends Neurosci., September 30, 2016

    M. Halassa and Acsády L.

  20. Live interaction distinctively shapes social gaze dynamics in rhesus macaques.

    J. Neurophysiol, September 30, 2016

    Dal Monte O., Piva M., Morris J.A., and S. Chang

  21. Stability and change in autism spectrum disorder diagnosis from age 3 to middle childhood in a high-risk sibling cohort.

    Autism, September 30, 2016

    Brian J., Bryson S.E., Smith I.M., Roberts W., Roncadin C., Szatmari P., et al.

  22. Prenatal beta-catenin/BRN2/TBR2 transcriptional cascade regulates adult social and stereotypic behaviors.

    Mol. Psychiatry, September 30, 2016

    Belinson H., Nakatani J., Babineau B.A., Birnbaum R.Y., Ellegood J., Bershteyn M., et al.

  23. LTD-like molecular pathways in developmental synaptic pruning.

    Nat. Neurosci., September 26, 2016

    Piochon C., Kano M., and C. Hansel

  24. Greater pupil size in response to emotional faces as an early marker of social-communicative difficulties in infants at high risk for autism.

    Infancy, September 20, 2016

    Wagner J.B., Luyster R.J., H. Tager-Flusberg, and C. Nelson

  25. Characterizing cognitive control abilities in children with 16p11.2 deletion using adaptive 'video game' technology: A pilot study.

    Transl. Psychiatry, September 18, 2016

    Anguera J.A., Brandes-Aitken A.N., Rolle C.E., Skinner S.N., Desai S.S., Bower J.D., et al.

  26. Normal evoked response to rapid sequences of tactile pulses in autism spectrum disorders.

    Front. Hum. Neurosci., September 15, 2016

    Ganesan S., Khan S., Garel K.A., Hämäläinen M.S., and T. Kenet

  27. The contribution of mosaic variants to autism spectrum disorder.

    PLOS Genet., September 14, 2016

    Freed D. and Pevsner J.

  28. Cortical feedback regulates feedforward retinogeniculate refinement.

    Neuron, September 6, 2016

    Thompson A.D., Picard N., Min L., M. Fagiolini, and C. Chen

  29. Zebrafish: A translational model system for studying neuropsychiatric disorders.

    J. Am. Acad. Child Adolesc. Psychiatry, August 31, 2016

    Ijaz S. and E. Hoffman

  30. Dysfunction of sensory oscillations in autism spectrum disorder.

    Neurosci. Biobehav. Rev., August 31, 2016

    Simon D.M. and M. Wallace

  31. Characterization of Greater Middle Eastern genetic variation for enhanced disease gene discovery.

    Nat. Genet., August 31, 2016

    Scott E.M., Halees A., Itan Y., Spencer E.G., He Y., Azab M.A., et al.

  32. Variants in HNRNPH2 on the X chromosome are associated with a neurodevelopmental disorder in females.

    Am. J. Hum. Genet., August 31, 2016

    Bain J.M., Cho M.T., Telegrafi A., Wilson A., Brooks S., Botti C., et al.

  33. Maternal immune activation: Implications for neuropsychiatric disorders.

    Science, August 18, 2016

    Estes M.L. and K. McAllister

  34. Loss and gain of MeCP2 cause similar hippocampal circuit dysfunction that is rescued by deep brain stimulation in a Rett syndrome mouse model.

    Neuron, August 16, 2016

    Lu H., Ash R.T., He L., Kee S.E., Wang W., Yu D., et al.

  35. Emergence of a Homo sapiens-specific gene family and chromosome 16p11.2 CNV susceptibility.

    Nature, August 10, 2016

    Nuttle X., Giannuzzi G., Duyzend M.H., Schraiber J.G., Narvaiza I., Sudmant P.H., et al.

  36. Subdimensions of social-communication impairment in autism spectrum disorder.

    J. Child Psychol. Psychiatry, July 31, 2016

    S. Bishop, Havdahl K.A., Huerta M., and C. Lord

  37. Autism spectrum disorder, developmental and psychiatric features in 16p11.2 duplication.

    J. Autism Dev. Disord., July 31, 2016

    L. Green Snyder, D'Angelo D., Chen Q., R. Bernier, R. Goin-Kochel, Wallace A.S., et al.

  38. Reciprocal white matter alterations due to 16p11.2 chromosomal deletions versus duplications.

    Hum. Brain Mapp., July 31, 2016

    Chang Y.S., Owen J.P., Pojman N.J., Thieu T., Bukshpun P., Wakahiro M.L., et al.

  39. Multisensory processes: A balancing act across the lifespan.

    Trends Neurosci., July 31, 2016

    Murray M.M., Lewkowicz D.J., Amedi A., and M. Wallace

  40. Differential sensory fMRI signatures in autism and schizophrenia: Analysis of amplitude and trial-to-trial variability.

    Schizophr. Res., July 31, 2016

    Haigh S.M., A. Gupta, Barb S.M., Glass S.A., Minshew N.J., I. Dinstein, et al.

  41. Complementary contributions of striatal projection pathways to action initiation and execution.

    Cell, July 27, 2016

    Tecuapetla F., Jin X., Lima S.Q., and R. Costa

  42. Microglia contribute to circuit defects in Mecp2 null mice independent of microglia-specific loss of Mecp2 expression.

    Elife, July 25, 2016

    D. Schafer, Heller C.T., Gunner G., Heller M., Gordon C., Hammond T., et al.

  43. Neural connectivity evidence for a categorical-dimensional hybrid model of autism spectrum disorder.

    Biol. Psychiatry, July 14, 2016

    Elton A., A. Di Martino, H. Hazlett, and Gao W.

  44. The number of genomic copies at the 16p11.2 locus modulates language, verbal memory, and inhibition.

    Biol. Psychiatry, July 14, 2016

    Hippolyte L., Maillard A.M., Rodriguez-Herreros B., Pain A., Martin-Brevet S., Ferrari C., et al.

  45. Peripheral mechanosensory neuron dysfunction underlies tactile and behavioral deficits in mouse models of ASDs.

    Cell, July 13, 2016

    L. Orefice, Zimmerman A.L., Chirila A.M., Sleboda S.J., Head J.P., and D. Ginty

  46. Autosomal-recessive mutations in the tRNA splicing endonuclease subunit TSEN15 cause pontocerebellar hypoplasia and progressive microcephaly.

    Am. J. Hum. Genet., July 6, 2016

    Breuss M.W., Sultan T., James K.N., Rosti R.O., Scott E., Musaev D., et al.

  47. Emerging executive functioning and motor development in infants at high and low risk for autism spectrum disorder.

    Front. Psychol., July 4, 2016

    St. John T., Estes A.M., S. Dager, Kostopoulos P., Wolff J.J., J. Pandey, et al.

  48. Ligation-free ribosome profiling of cell type-specific translation in the brain.

    Genome Biol., July 4, 2016

    Hornstein N., Torres D., Das Sharma S., G. Tang, Canoll P., and P. Sims

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