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Simons Foundation
Simons Foundation

Autism Research Initiative (SFARI)

  • Funding

    Explore open funding opportunities for autism research.

    Funding Opportunities

    Early Career Awards

    • Fellows to Faculty Award
    • Shenoy Undergraduate Research Fellowship in Neuroscience (SURFiN)

    Investigator Awards

    • New Ideas

    Symposia & Travel Awards

    • Conferences & Courses Award

    Shared Programs

    • Pivot Fellowship
    • Simons Society of Fellows

    Resource for Applying

    • Open Funding Opportunities
    • Policies & Procedures
    • Instructional Videos
    • Past Funded Work
  • Supported Work

    SFARI has supported over 750 investigators studying autism-related research.

    Research Highlights

    Research

    • SFARI Investigators
    • Funded Projects
    • Publications

    Data Access & Tools

    • SFARI Base
    • SFARI Gene
    • SFARI Genomes Browser

    Centers & Initiatives

    • Simons Center for the Social Brain
    • Simons Initiative for the Developing Brain

    Collaborations & Consortia

    • SFARI Sex Differences
    • Autism Rat Models Consortium
  • Resources

    Access data, biospecimens and participant cohorts through SFARI Base.

    SFARI Base

    Cohorts & Tissue Banks

    • SPARK
    • Simons Searchlight
    • Simons Simplex Collection
    • Autism BrainNet
    • Autism Inpatient Collection

    Other Resources

    • Animal Models
    • Biospecimens
    • Research Match

    Data Access & Tools

    • SFARI Base
    • SFARI Gene
    • SFARI Genomes Browser
    • Genotypes & Phenotypes in Families
  • News

    See the latest news and updates from SFARI.

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    • SFARI News
    • Research Highlights
    • Meeting & Workshop Reports
    • Funding News
  • About

    SFARI’s mission is to advance the basic science of autism and related neurodevelopmental disorders.

    About SFARI

    About SFARI

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Autism Research Initiative (SFARI) Autism Rat Models Consortium

Autism Rat Models Consortium: Publications

From ARC

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  1. Cellular and synaptic network defects in autism.

    Curr. Opin. Neurobiol., September 30, 2012

    Peça J. and G. Feng

  2. Unreliable evoked responses in autism.

    Neuron, September 19, 2012

    I. Dinstein, Lorenzi L., Minshew N.J., Malach R., and M. Behrmann

  3. The emerging biology of autism spectrum disorders.

    Science, September 13, 2012

    State M.W. and Sestan N.

  4. The E3 ubiquitin ligase protein associated with Myc (PAM) regulates mammalian/mechanistic target of rapamycin complex 1 (mTORC1) signaling in vivo through N- and C-terminal domains.

    J. Biol. Chem., August 30, 2012

    Han S., Kim S., Bahl S., Li L., Burande C.F., Smith N., et al.

  5. Optogenetic control of phosphoinositide metabolism.

    Proc. Natl. Acad. Sci. USA, August 27, 2012

    Idevall-Hagren O., Dickson E.J., Hille B., Toomre D.K., and De Camilli P.

  6. Neurexin and neuroligin mediate retrograde synaptic inhibition in Celegans.

    Science, August 23, 2012

    Hu Z., Hom S., Kudze T., Tong X.J., Choi S., Aramuni G., et al.

  7. Utility of the Social Communication Questionnaire-Current and Social Responsiveness Scale as teacher-report screening tools for autism spectrum disorders.

    J. Autism Dev. Disord., July 31, 2012

    Schanding G.T. Jr., Nowell K.P., and R. Goin-Kochel

  8. Modeling human cortical development in vitro using induced pluripotent stem cells.

    Proc. Natl. Acad. Sci. USA, July 30, 2012

    Mariani J., Simonini M.V., Palejev D., Tomasini L., G. Coppola, Szekely A.M., et al.

  9. Genome-wide transcriptome profiling reveals the functional impact of rare de novo and recurrent CNVs in autism spectrum disorder.

    Am. J. Hum. Genet., July 12, 2012

    Luo R., S. Sanders, Tian Y., Voineagu I., Huang N., Chu S.H., et al.

  10. Emotional and behavioral adjustment in typically developing siblings of children with autism spectrum disorders.

    J. Autism Dev. Disord., June 30, 2012

    Dempsey A.G., Llorens A., Brewton C., Mulchandani S., and R. Goin-Kochel

  11. Activity-dependent phosphorylation of GABA A receptors regulates receptor insertion and tonic current.

    EMBO J., June 28, 2012

    Saliba R.S., Kretschmannova K., and S. Moss

  12. Exome sequencing can improve diagnosis and alter patient management.

    Sci. Transl. Med., June 12, 2012

    Dixon-Salazar T.J., Silhavy J.L., Udpa N., Schroth J., S. Bielas, Schaffer A.E., et al.

  13. Maternal loss of Ube3a produces an excitatory/inhibitory imbalance through neuron type-specific synaptic defects.

    Neuron, June 6, 2012

    M. Wallace, Burette A.C., Weinberg R.J., and B. Philpot

  14. Differences in white matter fiber tract development present from 6 to 24 months in infants with autism.

    Am. J. Psychiatry, May 31, 2012

    Wolff J.J., Gu H., Gerig G., J. Elison, Styner M., Gouttard S., et al.

  15. Brain volume findings in 6-month-old infants at high familial risk for autism.

    Am. J. Psychiatry, May 31, 2012

    H. Hazlett, Gu H., McKinstry R.C., Shaw D.W., K. Botteron, S. Dager, et al.

  16. Whole exome sequencing identifies a splicing mutation in NSUN2 as a cause of a Dubowitz-like syndrome.

    J. Med. Genet., May 31, 2012

    Martinez F.J., Lee J.H., Lee J.E., Blanco S., Nickerson E., Gabriel S., et al.

  17. Functional regulation of GABAA receptors in nervous system pathologies.

    Curr. Opin. Neurobiol., May 31, 2012

    Hines R.M., Davies P.A., S. Moss, and Maguire J.

  18. Synapse adhesion: A dynamic equilibrium conferring stability and flexibility.

    Curr. Opin. Neurobiol., May 31, 2012

    D. Benson and G. Huntley

  19. Abnormal microglial-neuronal spatial organization in the dorsolateral prefrontal cortex in autism.

    Brain Res., May 24, 2012

    Morgan J.T., Chana G., Abramson I., Semendeferi K., E. Courchesne, and Everall I.P.

  20. A common X-linked inborn error of carnitine biosynthesis may be a risk factor for nondysmorphic autism.

    Proc. Natl Acad. Sci. USA,, May 21, 2012

    Celestino-Soper P.B.S., Violante S., Crawford E.L., Luo R., Lionel A.C., Delaby E., et al.

  21. KCTD13 is a major driver of mirrored neuroanatomical phenotypes of the 16p11.2 copy number variant.

    Nature, May 15, 2012

    Golzio C., Willer J., M. Talkowski, Oh E.C., Taniguchi Y., Jacquemont S., et al.

  22. Rett syndrome: Genes, synapses, circuits, and therapeutics.

    Front. Psychiatry, May 7, 2012

    Banerjee A., Castro J., and M. Sur

  23. Distinct plasma profile of polar neutral amino acids, leucine, and glutamate in children with autism spectrum disorders.

    J. Autism Dev. Disord., April 30, 2012

    Tirouvanziam R., Obukhanych T.V., Laval J., Aronov P.A., Libove R., Banerjee A.G., et al.

  24. Developmental trajectories of resting EEG power: An endophenotype of autism spectrum disorder.

    PLoS One, April 26, 2012

    Tierney A.L., Gabard-Durnam L., Vogel-Farley V., H. Tager-Flusberg, and C. Nelson

  25. High‐throughput sequencing of mGluR signaling pathway genes reveals enrichment of rare variants in autism

    PLoS One, April 26, 2012

    R. Kelleher, Geigenmüller U., Hovhannisyan H., Trautman E., Pinard R., Rathmell B., et al.

  26. De novo gene disruptions in children on the autistic spectrum.

    Neuron, April 25, 2012

    I. Iossifov, Ronemus M., Levy D., Wang Z., Hakker I., Rosenbaum J., et al.

  27. The emerging role of microRNAs in schizophrenia and autism spectrum disorders.

    Front. Psychiatry, April 24, 2012

    Mellios N. and M. Sur

  28. Functional consequences of mutations in postsynaptic scaffolding proteins and relevance to psychiatric disorders.

    Annu. Rev. Neurosci., April 19, 2012

    Ting J.T., Peça J., and G. Feng

  29. Whole-exome sequencing and homozygosity analysis implicate depolarization-regulated neuronal genes in autism.

    PLoS Genet., April 11, 2012

    M. Chahrour, Yu T.W., Lim E.T., Ataman B., Coulter M.E., Hill R.S., et al.

  30. The pathophysiology of fragile X (and what it teaches us about synapses)

    Annu. Rev. Neurosci., April 4, 2012

    Bhakar A.L., Dölen G., and M. Bear

  31. Sporadic autism exomes reveal a highly interconnected protein network of de novo mutations.

    Nature, April 3, 2012

    B. O'Roak, Vives L., S. Girirajan, Karakoc E., Krumm N., Coe B.P., et al.

  32. De novo mutations revealed by whole-exome sequencing are strongly associated with autism.

    Nature, April 3, 2012

    S. Sanders, Murtha M.T., A. Gupta, Murdoch J.D., Raubeson M.J., A. Willsey, et al.

  33. Relationship between the social functioning of children with autism spectrum disorders and their siblings’ competencies/problem behaviors.

    Res. Autism Spectr. Disord., April 1, 2012

    Brewton C.M., Nowell K.P., Lasala M.W., and R. Goin-Kochel

  34. Age-associated DNA methylation in pediatric populations.

    Genome Res., March 31, 2012

    Alisch RS, Barwick BG, Chopra P, Myrick LK, Satten GA, Conneely KN, et al.

  35. Tympanostomy tube placement in children with autism.

    J. Dev. Behav. Pediatr., March 31, 2012

    Ackerman S., Reilly B., and R. Bernier

  36. Synaptic cell adhesion.

    Cold Spring Harb. Perspect. Biol., March 31, 2012

    Missler M., Südhof T.C., and Biederer T.

  37. Simons Variation in Individuals Project (Simons VIP): A genetics-first approach to studying autism spectrum and related neurodevelopmental disorders.

    Neuron, March 21, 2012

    Simons VIP Consortium.

  38. Networks of neuronal genes affected by common and rare variants in autism spectrum disorders.

    PLoS Genet., March 7, 2012

    Ben-David E. and S. Shifman

  39. Neurocognitive and behavioral outcomes of younger siblings of children with autism spectrum disorder at age five.

    J. Autism Dev. Disord., February 29, 2012

    Z. Warren, Foss-Feig J.H., Malesa E.E., Lee E.B., Taylor J.L., Newsom C.R., et al.

  40. A multisite study of the clinical diagnosis of different autism spectrum disorders.

    Arch. Gen. Psychiatry, February 29, 2012

    C. Lord, E. Petkova, Hus V., Gan W., Lu F., Martin D.M., et al.

  41. Synaptic dysfunction in neurodevelopmental disorders associated with autism and intellectual disabilities.

    Cold Spring Harb. Perspect. Biol., February 29, 2012

    H. Zoghbi and M. Bear

  42. Evolutionarily assembled cis-regulatory module at a human ciliopathy locus.

    Science, February 23, 2012

    Lee J.H., Silhavy J.L., Lee J.E., Al-Gazali L., Thomas S., Davis E.E., et al.

  43. Preprocessing and quality control strategies for Illumina DASL assay-based brain gene expression studies with semi-degraded samples.

    Front. Genet., February 23, 2012

    Chow M.L., Winn M.E., Li H-R., April C., A. Wynshaw-Boris, Fan J-B., et al.

  44. PtdIns4P synthesis by PI4KIII-alpha at the plasma membrane and its impact on plasma membrane identity.

    J. Cell Biol., February 9, 2012

    Nakatsu F., Baskin J.M., Chung J., Tanner L.B., Shui G., Lee S.Y., et al.

  45. Accuracy of phenotyping children with autism based on parent report: What specifically do we gain phenotyping ‘rapidly’?

    Autism Res., January 31, 2012

    Z. Warren, Vehorn A., Dohrmann E., Nicholson A., J. Sutcliffe, and J. Veenstra-VanderWeele

  46. Postmortem cardiac tissue maintains gene expression profile even after late harvesting.

    BMC Genomics, January 16, 2012

    Gupta S., Halushka M.K., Hilton G.M., and D. Arking

  47. CEP41 is mutated in Joubert syndrome and is required for tubulin glutamylation at the cilium.

    Nat. Genet., January 14, 2012

    Lee J.E., Silhavy J.L., Zaki M.S., Schroth J., S. Bielas, Marsh S.E., et al.

  48. Predicting improvement in social-communication symptoms of autism spectrum disorders using retrospective treatment data.

    Res. Autism Spectr. Disord., January 1, 2012

    M. Mazurek, S. Kanne, and J. Miles

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