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Simons Foundation
Simons Foundation

Autism Research Initiative (SFARI)

  • Funding

    Explore open funding opportunities for autism research.

    Funding Opportunities

    Early Career Awards

    • Fellows to Faculty Award
    • Shenoy Undergraduate Research Fellowship in Neuroscience (SURFiN)

    Investigator Awards

    • New Ideas

    Symposia & Travel Awards

    • Conferences & Courses Award

    Shared Programs

    • Pivot Fellowship
    • Simons Society of Fellows

    Resource for Applying

    • Open Funding Opportunities
    • Policies & Procedures
    • Instructional Videos
    • Past Funded Work
  • Supported Work

    SFARI has supported over 750 investigators studying autism-related research.

    Research Highlights

    Research

    • SFARI Investigators
    • Funded Projects
    • Publications

    Data Access & Tools

    • SFARI Base
    • SFARI Gene
    • SFARI Genomes Browser

    Centers & Initiatives

    • Simons Center for the Social Brain
    • Simons Initiative for the Developing Brain

    Collaborations & Consortia

    • SFARI Sex Differences
    • Autism Rat Models Consortium
  • Resources

    Access data, biospecimens and participant cohorts through SFARI Base.

    SFARI Base

    Cohorts & Tissue Banks

    • SPARK
    • Simons Searchlight
    • Simons Simplex Collection
    • Autism BrainNet
    • Autism Inpatient Collection

    Other Resources

    • Animal Models
    • Biospecimens
    • Research Match

    Data Access & Tools

    • SFARI Base
    • SFARI Gene
    • SFARI Genomes Browser
    • Genotypes & Phenotypes in Families
  • News

    See the latest news and updates from SFARI.

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    • SFARI News
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    SFARI’s mission is to advance the basic science of autism and related neurodevelopmental disorders.

    About SFARI

    About SFARI

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A circular, abstract pattern with irregular, jagged white lines and shapes on a light gray background, resembling a textured surface or cracked ground.
Autism Research Initiative (SFARI) Research

Research: Funded Projects

SFARI supports more than 250 investigators each year and has committed over $525 million to autism research since 2006.

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Results

  1. Integrated anatomical and gene expression phenotyping in mouse models of autism

    Funded Work
    Genetic disruption of gene-regulatory proteins has emerged as a major underlying cause of autism and related neurodevelopmental disorders (ASD/NDD).
  2. Functionally characterizing genetic variants in the activation domains of autism-associated transcription factors

    Funded Work
    There has been tremendous progress in identifying the genetic basis of autism spectrum disorder (ASD).
  3. Real-time tracking and control of brain neuropeptide levels in a mouse model of autism

    Funded Work
    Dysregulated levels of neuromodulators and other chemical signals may contribute to behavioral characteristics of autism spectrum disorder (ASD).
  4. Quantitative motor phenotyping in nonsyndromic autism and chromatin modifying disorders

    Funded Work
    Delayed or impaired motor development can detrimentally affect environmental exploration, social engagement and spatial perception.
  5. The epitranscriptome in the maternal immune activation model of neurodevelopmental conditions

    Funded Work
    Environmental perturbations that disrupt fetal neurodevelopment are strongly associated with autism spectrum disorder (ASD).
  6. Annotation of the synaptic interactome and synaptic pathways relevant for autism

    Funded Work
    Large-scale genetic studies are producing valuable new leads to understand disease mechanisms and identify new treatment targets.
  7. Computational phenotyping of individual variation in latent-state learning, generalization and attention across the autism spectrum

    Funded Work
    People with autism spectrum disorder (ASD) often exhibit rigid patterns of behavior, manifesting as difficulty generalizing when encountering a new example of something known or something known in …
  8. Decoding excitation-inhibition imbalance from neuroimaging data in autism

    Funded Work
    Imbalance between excitatory and inhibitory signals in the brain (i.e., E/I imbalance) has long been theorized as one of the primary pathophysiological explanations behind autism.
  9. High-resolution proteome mapping in the developing human cerebral cortex to uncover mutationally convergent pathways in autism

    Funded Work
    Genetic alterations in autism spectrum disorder (ASD) ultimately manifest at the protein level.
  10. Prenatal COVID-19 impact on autism risk in genetically susceptible families

    Funded Work
    Increased risk for autism spectrum disorder (ASD) associated with gestational fever, infections, stress and other inflammatory events and innate immune responses and dysregulation suggest the need to study …
  11. Validation of a digital movement-based measure of early social communication

    Funded Work
    Despite commonalities in core social communication traits, young children on the autism spectrum show significant phenotypic heterogeneity and variability in response to interventions focused on improving social communication.
  12. Genetics and Artificial Intelligence for Individualized Neural Stratification (GAIINS)

    Funded Work
    Personalized medicine in autism requires stratification biomarkers because of substantial biological heterogeneity.
  13. Identifying early markers of autism in naturalistic motor behavior using high-frequency sampling

    Funded Work
    Early identification of infants at risk for autism spectrum disorder (ASD) is a huge challenge because neither genetic nor neuroimaging methods have revealed robust early pathological markers for …
  14. Long-term ethological monitoring of motor and social behaviors in mouse models of autism

    Funded Work
    Autism spectrum disorder (ASD) is characterized by heterogeneous phenotypes classically encompassing three domains — difficulties with social interactions, language communication challenges and an overrepresentation of stereotyped behaviors.
  15. Validation of an online Neurobehavioral Evaluation Tool (NET) across large autism cohorts

    Funded Work
    Autism spectrum disorder (ASD) is an etiologically and phenotypically heterogenous condition.
  16. Role of autism risk genes in frontal-sensory cognitive control circuits in mice

    Funded Work
    Cognitive control deficits are one of the frequent challenges accompanying autism spectrum disorder (ASD).
  17. Assessing the functions of autism risk genes in deep layer cortical neurons during primate midfetal development

    Funded Work
    The prefrontal cortex (PFC) is critical for a myriad of higher-order brain functions, including working memory, planning, decision-making, language and creative intelligence.
  18. Leveraging computational modeling and data-driven clustering approaches to constrain the heterogeneity of autism phenotypes

    Funded Work
    In this project, Gabriela Rosenblau and colleagues aim to systematically investigate and constrain the heterogeneity of autism spectrum disorder (ASD) by providing a fine-grained mechanistic characterization of …
  19. Electroretinogram activity and peripheral FMRP levels: Correlate biomarkers for fragile X spectrum disorders

    Funded Work
    FMRP is a multifunctional protein essential for normal brain development and neuronal plasticity.
  20. Dissecting social attention in autism using large-sample eye tracking over the Internet

    Funded Work
    Among the multiple cognitive processes that are atypical in people with autism, attention stands out as one of the most important.
  21. The cortical head direction system as a model for systems-level alterations in rat models of autism

    Funded Work
    In the current project, Paul Dudchenko provides a detailed neural and behavioral characterization of three rat models of autism spectrum disorder/intellectual disability (ASD/ID): Fmr1-/y, Grin2b …
  22. The COUNT project: Using multiomic profiling to identify predictors of autism traits

    Funded Work
    Autism spectrum disorder (ASD), a chronic and heterogeneous condition with many traits and co-occurring conditions, is poorly understood.
  23. 2022 Awardees

    Funded Work
  24. Topology of cortical and thalamic gene expression changes in autism

    Funded Work
    In work that began nearly 15 years ago, Daniel Geschwind and collaborators identified a shared pattern of transcriptomic and epigenetic dysregulation in postmortem brain tissue of people with …
  25. Using human innervated intestinal organoids to study enteric glial dysfunction in autism

    Funded Work
    Gut disturbances are unusually common in individuals with autism spectrum disorder (ASD), but the basis of these gut irregularities is not yet known.
  26. Neural basis for observational learning in autism mouse models

    Funded Work
    Autism spectrum disorder (ASD) is a pervasive neurodevelopmental condition with core characteristics that are broadly categorized as problems with social engagement that are proposed, in part, to emanate …
  27. The role of the superior colliculus in tactile sensory processing in mouse models of autism

    Funded Work
    More than 90 percent of individuals diagnosed with autism spectrum disorder (ASD) exhibit sensory alterations, with 60 percent displaying altered tactile sensitivity.
  28. Zebrafish functional analysis of autism risk genes

    Funded Work
    The goal of this project is to investigate genes that increase risk for autism spectrum disorder (ASD) by characterizing mutant zebrafish.
  29. Classifying axon pathology in autism using machine learning and deep neural network analyses

    Funded Work
    Axon pathology is at the core of disruptions in cortical connectivity in autism spectrum disorder (ASD).
  30. Cellular resolution multi-omics of white matter tracts in autism

    Funded Work
    White matter tracts are understudied brain regions with respect to the pathophysiology of autism spectrum disorder (ASD).
  31. Identification and impact of somatic mutations in regulatory regions in autism brain

    Funded Work
    Autism spectrum disorder (ASD) has a large genetic component, but the underlying cause of ASD has not been identified in most affected individuals.
  32. Cortico-cerebellar communication during flexible motor control in mouse models of autism

    Funded Work
    Motor impairments, from altered coordination to reduced flexibility of movements, are among the core features of autism spectrum disorder (ASD).
  33. Functionalizing the autism variome

    Funded Work
    The last four decades have produced an enormous catalog of human genomic variants which has the potential to revolutionize human genetics.
  34. Developing Rat MoSeq to characterize autism models

    Funded Work
    Capturing variation in behavioral phenotypes expressed across rodent models of autism spectrum disorder (ASD) remains a challenge.
  35. Visual, perceptual and neurophysiological alterations in an Scn2a knockout rat model of autism

    Funded Work
    Atypical sensory experiences affect around 90 percent of individuals with autism spectrum disorder (ASD).
  36. Targeting autism haploinsufficiency with novel molecular feedback circuits

    Funded Work
    Many cases of autism spectrum disorder (ASD) are caused by reduced expression of dosage-sensitive genes.
  37. Critical period plasticity underlying complex learning in autism rat models

    Funded Work
    During early postnatal development, many neocortical brain areas exhibit “sensitive periods” where circuit refinement is driven by experience, by engaging both Hebbian (correlation-based) and homeostatic forms of …
  38. Neural coordination mechanisms underlying social interactions in rat models of autism

    Funded Work
    Challenges in social communication are one of the core symptoms of autism spectrum disorder (ASD).
  39. Characterizing social impairments and the role of dopamine in autism rat models

    Funded Work
    This project takes advantage of the rat as a model system to parse the role of striatal dopamine in social behaviors, specifically probing whether and how dysfunction in …
  40. Understanding the cellular and circuit bases for behavioral impairments in the Scn2a knock-out rat

    Funded Work
    To advance our understanding of autism spectrum disorder (ASD) and to develop novel therapeutics, it is critical to understand how genetic and cellular changes lead to changes in …
  41. Cell-type-specific interactome disruption prioritize risk missense mutations for autism

    Funded Work
    Through the sequencing efforts of the Simons Simplex Collection (SSC), Simons Foundation Powering Autism Research (SPARK) and Autism Sequencing Consortium (ASC), thousands of de novo coding mutations have …
  42. Understanding insomnia in the autism spectrum using mouse models

    Funded Work
    Sleep problems occur at a higher rate in people with autism spectrum disorder (ASD), affecting up to 93 percent of people with ASD.
  43. COVID-19 in pregnancy and early childhood: COPE study

    Funded Work
    It is unknown how the COVID-19 pandemic affects pregnant women and their offspring.
  44. Enhancing reciprocal cooperation through prefrontal microstimulation

    Funded Work
    Reciprocal cooperation is a hallmark of social groups and is central to successful social interaction, playing a major role in evolutionarily shaping brain functions and enabling rich social …
  45. Tracking sensory signals across multiple cortical areas during impaired sensory perception in Cntnap2 knockout mice

    Funded Work
    Altered sensory processing is a core and predictive feature of autism spectrum disorder (ASD).
  46. The role of cortical feedback during auditory perception in a mouse model of autism

    Funded Work
    Individuals with autism spectrum disorder (ASD) perceive and experience the world differently than neurotypical individuals.
  47. Genomic variation in centromeric proximal regions and risk of autism

    Funded Work
    Like many complexly inherited conditions, autism shows high heritability, yet the inventory of identified genomic variants appears to explain only a modest portion of the risk.
  48. Anomalous visual integration in mouse models of autism

    Funded Work
    Autism spectrum disorder (ASD) results from alterations in the development of neural circuits in the brain and leads to a variety of clinical conditions, including insistence on sameness …
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