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Simons Foundation
Simons Foundation

Autism Research Initiative (SFARI)

  • Funding

    Explore open funding opportunities for autism research.

    Funding Opportunities

    Early Career Awards

    • Fellows to Faculty Award
    • Shenoy Undergraduate Research Fellowship in Neuroscience (SURFiN)

    Investigator Awards

    • New Ideas

    Symposia & Travel Awards

    • Conferences & Courses Award

    Shared Programs

    • Pivot Fellowship
    • Simons Society of Fellows

    Resource for Applying

    • Open Funding Opportunities
    • Policies & Procedures
    • Instructional Videos
    • Past Funded Work
  • Supported Work

    SFARI has supported over 750 investigators studying autism-related research.

    Research Highlights

    Research

    • SFARI Investigators
    • Funded Projects
    • Publications

    Data Access & Tools

    • SFARI Base
    • SFARI Gene
    • SFARI Genomes Browser

    Centers & Initiatives

    • Simons Center for the Social Brain
    • Simons Initiative for the Developing Brain

    Collaborations & Consortia

    • SFARI Sex Differences
    • Autism Rat Models Consortium
  • Resources

    Access data, biospecimens and participant cohorts through SFARI Base.

    SFARI Base

    Cohorts & Tissue Banks

    • SPARK
    • Simons Searchlight
    • Simons Simplex Collection
    • Autism BrainNet
    • Autism Inpatient Collection

    Other Resources

    • Animal Models
    • Biospecimens
    • Research Match

    Data Access & Tools

    • SFARI Base
    • SFARI Gene
    • SFARI Genomes Browser
    • Genotypes & Phenotypes in Families
  • News

    See the latest news and updates from SFARI.

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    News

    • SFARI News
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    SFARI’s mission is to advance the basic science of autism and related neurodevelopmental disorders.

    About SFARI

    About SFARI

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A circular, abstract pattern with irregular, jagged white lines and shapes on a light gray background, resembling a textured surface or cracked ground.
Autism Research Initiative (SFARI) Research

Research: Funded Projects

SFARI supports more than 250 investigators each year and has committed over $525 million to autism research since 2006.

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Results

  1. Identification and validation of expression quantitative trait loci (eQTLs) in discrete cell types across human brain development

    Funded Work
    Functional genomic analyses of the developing human brain have revealed highly dynamic spatiotemporal patterns of gene expression and epigenetic changes during prenatal and early postnatal development and across …
  2. Mapping the common genetic architecture of fine and gross infant motor development in the context of autism

    Funded Work
    Motor development is a central feature in the first two years of life.
  3. Advancing a monkey model of social impairment

    Funded Work
    Karen Parker’s team has used the extremes of naturally occurring variation in the social behavior of rhesus monkeys to develop a novel model of social deficits with …
  4. Development of antisense oligonucleotides for SYNGAP1 haploinsufficiency associated with autism spectrum disorder and intellectual disability

    Funded Work
    Precise synaptic connectivity and plasticity are critical for human cognition.
  5. Neuromodulatory control of cerebellar non-motor functions in mouse models of autism

    Funded Work
    Autism spectrum disorder (ASD) can arise from a multitude of genetic and environmental factors and span a wide range of features, including difficulties in social interactions, restricted interests …
  6. The role of heparan sulfate motifs in regulating neurexin function and synaptic development

    Funded Work
    Mutations in neurexins have been identified in genetic studies and animal models as risk factors for autism spectrum disorders (ASDs).
  7. A human brain organoid model of neural network dysregulation in neurodevelopmental conditions

    Funded Work
    Brain oscillations are critical for neural computation and can serve as a biomarker of excitatory-inhibitory (E/I) balance in neural circuits.
  8. Leveraging systemic adeno-associated viral vectors to ameliorate autism-associated phenotypes in a mouse model of neurofibromatosis type 1

    Funded Work
    Neurofibromatosis type 1 (NF1) is an autosomal dominant disorder affecting 1 in 3,500 individuals worldwide due to inactivating mutations in the NF1 gene.
  9. Cellular and molecular analysis of Setd2 function during cortical neurogenesis

    Funded Work
    Many of the genes strongly associated with autism spectrum disorder (ASD) risk encode chromatin modifiers that regulate gene expression during neurogenesis.
  10. Computerized assessment of motor imitation (CAMI): Advancing the validity and scalability of a promising phenotypic biomarker for autism

    Funded Work
    In the current project, Stewart Mostofsky and colleagues plan to use computer vision technology to examine motor imitation ability, which is known to be crucial for social-communicative …
  11. Mapping circuits and physiological mechanisms for disrupted behavioral imitation in a FoxP1 songbird model of autism

    Funded Work
    Humans and other animals learn many of their complex and socially-oriented behaviors by imitating more experienced individuals in their environment.
  12. Identifying substrates of UBE3A-mediated ubiquitination in neural progenitor cells and cortical neurons

    Funded Work
    Autism spectrum disorders (ASDs) are neurodevelopmental syndromes associated with diverse genetic alterations.
  13. Defining the regulatory landscape of autism susceptibility genes in human neurons

    Funded Work
    Individuals with autism spectrum disorders (ASDs) exhibit phenotypic diversity that reflects the complex genetic architecture of this group of conditions, which is influenced by hundreds of rare variants …
  14. Evaluating molecular changes in the brain of Chd8 mutant mice as a function of age

    Funded Work
    Genetic risks for autism are diverse and encompass mutations and copy number variations in hundreds of genes.
  15. The Autism Inpatient Collection: Expanding the cohort and transforming the approach to aggression

    Funded Work
    Unpredictable and potentially dangerous aggressive behavior by youth with autism spectrum disorder (ASD) isolates them from foundational educational, social and familial activities, thereby markedly exacerbating morbidity and costs …
  16. Gut-intrinsic mechanisms of gastrointestinal dysmotility in zebrafish models of autism

    Funded Work
    Gastrointestinal (GI) distress is pervasive in autism spectrum disorders (ASDs).
  17. How do neurexins promote presynaptic development?

    Funded Work
    Neurexins constitute a family of presynaptic transmembrane molecules that interact with postsynaptic cell adhesion molecules, most notably neuroligins.
  18. Assembly of cortical microcircuit motifs in a mouse model of Arid1b haploinsufficiency

    Funded Work
    The cerebral cortex contains diverse types of excitatory projection neurons and inhibitory interneurons that form specific circuits to support healthy brain function.
  19. Behavioral phenotyping of rat models of autism

    Funded Work
    New technologies for efficiently manipulating genomes have expanded autism research to mammalian models beyond the mouse.
  20. Integrated metagenomic analysis of the oral microbiome in autism spectrum disorders

    Funded Work
    Recent efforts in the area of microbiome research have suggested a potential role of the human microbiome in mediating the effects of genetic and environmental risk factors on …
  21. High-throughput screening assay to identify modulators of CHD8 expression

    Funded Work
    CHD8 is a regulatory gene that binds to the promoters of autism spectrum disorder (ASD) risk genes and remodels chromatin accessibility.
  22. Assessing the role of predictive processing in autism using electrophysiological modeling of neural responses to natural speech

    Funded Work
    A wealth of research has amassed that points to substantial sensory and language processing deficits in autism.
  23. Development of genetic therapies for STXBP1 haploinsufficiency

    Funded Work
    Pathogenic mutations in STXBP1 cause a developmental and epileptic encephalopathy (DEE) with an occurrence of approximately one in 35,000 children.
  24. Neural mechanisms underlying sleep disturbances in Syngap1+/- mutant mice

    Funded Work
    Many children with autism spectrum disorder (ASD) suffer from sleep disturbances such as difficulties in falling asleep, staying asleep or waking up early.
  25. Elucidating early disruptions of brain activity in mouse models of autism

    Funded Work
    Autism spectrum disorders (ASDs) are complex, multigene conditions which ultimately converge to cause changes in the electrical activity in the brain.
  26. Antisense gene therapy for dominant haploinsufficiencies associated with autism

    Funded Work
    Recent breakthroughs in antisense oligonucleotide (ASO) therapy have demonstrated that the damaging effects of some disease-causing mutations can be corrected in vivo.
  27. Population coding in the sensory cortex in multiple mouse models of autism

    Funded Work
    The sensory and cognitive features of autism spectrum disorders (ASDs) must have origins in altered neural coding and information processing.
  28. Identifying altered gene regulatory networks at single-cell resolution along the trajectory of brain development in autism spectrum disorders

    Funded Work
    A strong genetic component exists among individuals with autism spectrum disorder (ASD), with an estimated heritability up to 80–90 percent; however, our existing knowledge can only explain …
  29. Neuronal activity-dependent chromatin remodeling in autism

    Funded Work
    Extensive genetic evidence implicates mutations in genes that encode subunits of the BAF chromatin remodeling complex (e.g., ACTL6B, ARID1B, ARID2, ATRX, BICRA, SMARCA2, SMARCA4 and SMARCC2) as …
  30. The initial standardization of the Brief Observation of Symptoms of Autism (BOSA)

    Funded Work
    The Autism Diagnostic Observation Schedule (ADOS-2) provides a way for clinicians to observe the social communicative behavior and play/imagination of a participant and to place these …
  31. Defining the role of autism risk genes in GABAergic structural plasticity

    Funded Work
    GABAergic neuronal signaling is essential in the development and basic functioning of the nervous system.
  32. Functional evaluation and curation of SCN2A variants associated with autism

    Funded Work
    SCN2A, which encodes the alpha subunit of the neuronal voltage-gated sodium channel 1.2 (Nav1.2), is a high-confidence risk gene for autism spectrum disorders (ASD).
  33. Enhancer-targeted correction of haploinsufficient autism risk genes

    Funded Work
    Autism spectrum disorder (ASD) is a highly heterogeneous and highly heritable condition with complex genetic contributions, and yet 20 percent of genetic risk is imparted by de novo …
  34. Integrative metabolomics of autism spectrum disorders

    Funded Work
    Although approximately 50 percent of the risk of autism spectrum disorder (ASD) is genetic, genetics alone is insufficient for diagnosis and imparts little clinical utility for non-syndromic …
  35. A spatiotemporal atlas of autism risk gene expression in the human cortex

    Funded Work
    Autism spectrum disorder (ASD) is a multifactorial spectrum of neurodevelopmental conditions with complex genetic traits underlying their etiology.
  36. Investigating a novel link between ANK2 and SCN2A to control dendritic excitability

    Funded Work
    Thanks to the Simons Simplex Collection and other genetic cohorts of individuals with autism spectrum disorder (ASD), over 100 high-confidence risk genes have now been identified.
  37. Elucidating the consequence of R-loop deregulation in autism spectrum disorders

    Funded Work
    A large number of mutations in chromatin regulatory proteins have been observed in autism spectrum disorders (ASDs).
  38. Identification of cell-type-specific isoforms of autism risk genes expressed during neocortical development

    Funded Work
    Alternative splicing is recognized as a major mechanism to increase protein diversity by shuffling coding gene sequences.
  39. Molecular and functional characterization of circuits underlying social motivation in mouse models of autism

    Funded Work
    Animals display a strong motivation to engage in social interactions and maintain social bonds.
  40. Inhibition of an RNA-binding protein as a treatment for fragile X syndrome

    Funded Work
    Fragile X syndrome (FXS), an autism spectrum disorder (ASD) and the most common genetic form of intellectual disability in males, is caused by the loss of function of …
  41. Understanding and manipulating cortex-wide neural dynamics across multiple mouse models of autism

    Funded Work
    Autism spectrum disorder (ASD) is difficult to diagnose and treat because it is a heterogenous condition with diverse molecular and genetic etiologies.
  42. Developmental and cell type-specific origin of autism pathology at single-cell resolution

    Funded Work
    Autism spectrum disorders (ASDs) represent a heterogeneous group of neurodevelopmental conditions with a strong genetic basis.
  43. Investigating the contribution of peripheral sensory neuron dysfunction to gastrointestinal-related phenotypes in mouse models of autism

    Funded Work
    Autism spectrum disorders (ASDs) are prevalent neurodevelopmental disorders, characterized by difficulties in social communication and interactions as well as restricted, repetitive behaviors.
  44. High-throughput screening of Drosophila models to identify autism gene networks that disrupt sleep and circadian rhythms

    Funded Work
    Sleep and circadian (approximately 24 hour) rhythm disturbances are prevalent in as many as 80 percent of individuals with autism spectrum disorders (ASDs).
  45. Analysis of FMRP-ribosome interactions

    Funded Work
    Fragile X syndrome (FXS) is the most common cause of inherited intellectual impairment and the most frequent single gene cause of autism.
  46. Disrupted stimulus offset responses in autism spectrum disorder

    Funded Work
    A decrease in cortical neural inhibition has been hypothesized to be a primary contributor to the neurobiological basis of autism spectrum disorder (ASD)1.
  47. Developmental barcoding and lineage mapping of the brain in neurotypical mice and mouse models of autism

    Funded Work
    The foundation for the functional and anatomical complexity of the brain is laid during embryogenesis, when the neural plate develops into the entire central nervous system in a …
  48. Both overstimulated and understimulated: Gain control in children with autism

    Funded Work
    Individuals with autism spectrum disorder (ASD) often report that their sensory processing difficulties are particularly bothersome.
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