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Simons Foundation
Simons Foundation

Autism Research Initiative (SFARI)

  • Funding

    Explore open funding opportunities for autism research.

    Funding Opportunities

    Early Career Awards

    • Fellows to Faculty Award
    • Shenoy Undergraduate Research Fellowship in Neuroscience (SURFiN)

    Investigator Awards

    • New Ideas

    Symposia & Travel Awards

    • Conferences & Courses Award

    Shared Programs

    • Pivot Fellowship
    • Simons Society of Fellows

    Resource for Applying

    • Open Funding Opportunities
    • Policies & Procedures
    • Instructional Videos
    • Past Funded Work
  • Supported Work

    SFARI has supported over 750 investigators studying autism-related research.

    Research Highlights

    Research

    • SFARI Investigators
    • Funded Projects
    • Publications

    Data Access & Tools

    • SFARI Base
    • SFARI Gene
    • SFARI Genomes Browser

    Centers & Initiatives

    • Simons Center for the Social Brain
    • Simons Initiative for the Developing Brain

    Collaborations & Consortia

    • SFARI Sex Differences
    • Autism Rat Models Consortium
  • Resources

    Access data, biospecimens and participant cohorts through SFARI Base.

    SFARI Base

    Cohorts & Tissue Banks

    • SPARK
    • Simons Searchlight
    • Simons Simplex Collection
    • Autism BrainNet
    • Autism Inpatient Collection

    Other Resources

    • Animal Models
    • Biospecimens
    • Research Match

    Data Access & Tools

    • SFARI Base
    • SFARI Gene
    • SFARI Genomes Browser
    • Genotypes & Phenotypes in Families
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    See the latest news and updates from SFARI.

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    SFARI’s mission is to advance the basic science of autism and related neurodevelopmental disorders.

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A circular, abstract pattern with irregular, jagged white lines and shapes on a light gray background, resembling a textured surface or cracked ground.
Autism Research Initiative (SFARI) Research

Research: Funded Projects

SFARI supports more than 250 investigators each year and has committed over $525 million to autism research since 2006.

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Results

  1. Integrating germline and mosaic mutations to uncover novel autism risk genes and biological mechanisms

    Funded Work
    Approximately 100 risk genes for autism spectrum disorder (ASD) have emerged from studies focused on identifying germline de novo mutations (GDMs) within the exome.
  2. A tRNA-based gene therapy approach for high-fidelity repair of SCN2A premature termination codons

    Funded Work
    The SCN2A gene encodes the alpha subunit of the neuronal voltage-gated sodium channel NaV1.2.
  3. Assessing the role of NOTCH2NL in autism

    Funded Work
    Genomic copy number variation (CNV) of part of human chromosome 1 (1q21.1 distal deletion/duplication interval) has been associated with autism spectrum disorder (ASD) in multiple studies …
  4. Synaptic dysregulation in Chd8 haploinsufficient mice

    Funded Work
    High-confidence autism risk genes fall within several distinct functional categories, which include synaptic genes, WNT pathway genes and genes encoding chromatin remodeling factors.
  5. Identification and manipulation of splicing variants that contribute to autism

    Funded Work
    Gene-disrupting genetic variants frequently lead to neurodevelopmental disorders, including autism spectrum disorder (ASD), when they occur in one of the several hundred genes associated with these conditions.
  6. Speeding up autism gene discovery via deep multitask learning of data from cohorts of comorbid neurodevelopmental and neuropsychiatric disorders

    Funded Work
    Computational gene risk prediction methods and network-based analyses are major tools in analyzing large autism spectrum disorder (ASD) datasets based on whole-exome and whole-genome sequencing …
  7. Network activity and homeostatic plasticity as endophenotypes for autism

    Funded Work
    The search for therapies for autism spectrum disorder (ASD) might benefit from discovering reliable endophenotypes in animal models, especially if these could be adapted to in vitro assays …
  8. Gastrointestinal dysfunction and the gut-brain axis in a Chd8 mouse model of autism

    Funded Work
    Gastrointestinal issues have been identified as a comorbidity of autism spectrum disorder (ASD).
  9. Characterizing motor deficits and striatal circuit dynamics in rat models of autism

    Funded Work
    Much progress has been made in our understanding of the genetic and molecular factors underlying autism, and how they affect structural and electrophysiological properties of single neurons and …
  10. Linking neuroimmune dysfunction, sensory system deficits and behavioral phenotypes in a new mouse model of MEF2C haploinsufficiency syndrome

    Funded Work
    In addition to social challenges and communication difficulties, a commonly associated feature of autism spectrum disorder (ASD) is alterations in sensory function, including changes in touch, vision and …
  11. Electroencephalography and eye-tracking measures as scalable biomarker-based predictors of ASD in high-risk infants

    Funded Work
    Despite tremendous efforts by parents, researchers, clinicians and educators, autism spectrum disorder (ASD) continues to present a significant lifelong challenge to most affected individuals and their families.
  12. Evaluating two newly developed treatment outcome measures (BOSCC and ELSA) in the context of an ASD behavioral intervention trial

    Funded Work
    Impairments in social communication are among the core symptoms of autism spectrum disorder (ASD), but there are currently no available, well-validated, objective measures that could be used …
  13. Using computational models to understand social learning in children with autism

    Funded Work
    Behavioral treatments for children with autism spectrum disorder (ASD) seek to improve how children learn about others.
  14. Elucidating mechanisms underlying fever-associated rescue of behavioral phenotypes relevant to autism

    Funded Work
    Fever, the increase in body temperature that follows infection, is typically associated with sickness behaviors, such as lethargy and a lack of appetite.
  15. Integrated single-cell and functional analysis of Dup15q syndrome

    Funded Work
    Autism spectrum disorder (ASD) is a major global health concern, affecting 1 in 59 children in the United States.
  16. CRISPR activation-based approach to rescue cellular and behavioral deficits associated with Scn2a haploinsufficiency

    Funded Work
    Mutations identified by exome sequencing demonstrate that disruption of the gene SCN2A, which encodes the alpha subunit of the neuronal voltage-gated sodium channel 1.2 (Nav1.2 …
  17. Brain-wide mapping of sensory circuitry in zebrafish models of autism

    Funded Work
    Autism spectrum disorder (ASD) is classically characterized by its social and cognitive symptoms, but changes in sensory processing also occur, and these may contribute to, or even be …
  18. Tuning the mouse maternal immune system with human-derived bacteria to prevent neurodevelopmental abnormalities in offspring

    Funded Work
    Uncontrolled inflammation during pregnancy, coined ‘maternal immune activation’ (MIA), may induce behavioral phenotypes and brain pathologies relevant to autism in affected offspring.
  19. Disruption of basal ganglia maturation by cortical hyperactivity in the Shank3 mouse model of autism

    Funded Work
    While the neural substrates and pathophysiological mechanisms underlying the onset of cognitive and motor deficits in autism spectrum disorder (ASD) remain unclear, research suggests that aberrant corticostriatal development …
  20. Building phenotypic maps based on neuronal activity and transcriptional profiles in human cell models of syndromic forms of ASD

    Funded Work
    Genetic analyses of large cohorts of individuals with autism spectrum disorder (ASD) have enabled the identification of numerous de novo and inherited rare DNA variants linked to ASD.
  21. Generation of zebrafish mutants in homologs of ASD risk genes

    Funded Work
    With more than 100 genes causally linked to autism spectrum disorders (ASDs), the next major challenge is to discover the neurodevelopmental consequences of different genetic mutations.
  22. Using newly developed computational tools to assess the contribution of tandem repeat mutations to autism risk

    Funded Work
    It is now widely appreciated that de novo mutations contribute to a large fraction of autism spectrum disorders (ASD) risk.
  23. Validation of a tablet-based biobehavioral battery of tests applicable across age and ability levels in autism

    Funded Work
    A key challenge for clinical trials of autism spectrum disorder (ASD) is the lack of objective measures that are sensitive to changes in core features.
  24. Transcriptional regulation during brain development and in autism

    Funded Work
    Analyses of penetrant mutations and transcriptome studies implicate transcriptional dysregulation within the fetal cerebral cortex in the pathophysiology of autism spectrum disorders (ASD).
  25. Clinical characterization of childhood disintegrative disorder and implications for regression in autism

    Funded Work
    The 2013 Strategic Plan of the Interagency Autism Coordinating Committee described regression as one of the most mysterious and troubling aspects of autism spectrum disorder (ASD) and set …
  26. Multisite validation study of eye-tracking-based measures of autism symptom severity

    Funded Work
    Autism spectrum disorder (ASD) is characterized by impairments in social communication/interaction (SCI) and the presence of restricted/repetitive behaviors (RRB) and is often accompanied by language impairment.
  27. Digital behavioral outcome measures for autism spectrum disorder

    Funded Work
    A long-term goal of Guillermo Sapiro’s laboratory is to develop and validate sensitive, objective, reliable and scalable digital tools for measuring outcomes in autism spectrum disorder …
  28. Delineation of the role of the autism risk gene DEAF1 in corticothalamic development

    Funded Work
    Autism spectrum disorder (ASD) is a neurodevelopmental disorder whose underlying genetic basis has started to be revealed through the use of advanced genetic tools.
  29. Delineating the neuronal underpinnings of social interactive behavior

    Funded Work
    A hallmark of autism spectrum disorder (ASD) is difficulty with social interactions, including reduced social reciprocity and cooperative behavior, that in turn may stem from the inability to …
  30. Screening for convergence of axonal dysfunction across diverse mouse models of autism

    Funded Work
    The neural mechanisms that underlie the cognitive and behavioral deficits in autism spectrum disorders (ASDs) are not well understood at the circuit level, although there is converging evidence …
  31. CRISPR/Cas9-based early intervention for Angelman syndrome

    Funded Work
    Angelman syndrome (AS) is a severe neurodevelopmental disorder caused by deletion or mutation of the maternal allele UBE3A.
  32. Connectivity-based Bayesian nonparametric modeling of individual variability in autism

    Funded Work
    Each individual with autism spectrum disorder (ASD) is unique, but there are patterns in individual variability.
  33. Elucidating the role of the autism risk gene Tbr1 in synaptic development in mice

    Funded Work
    Tbr1, a high-confidence autism spectrum disorder (ASD) risk gene, encodes a T-box transcription factor that plays a central role in the development of early-born cortical …
  34. Dysregulation of the integrated stress response pathway in fragile X syndrome

    Funded Work
    Several brain disorders, with high rates of autism, such as tuberous sclerosis, PTEN hamartoma syndrome and fragile X syndrome (FXS), are associated with a loss of function of …
  35. Augmentation of serotonergic signaling during development in a mouse model of autism: A mechanism to regulate choroid plexus function?

    Funded Work
    Building the cerebral cortex requires the orchestration of molecular signals spatially synchronized across neural progenitor cells.
  36. Developmental dysfunction of inhibition in a Mef2C mouse model of autism

    Funded Work
    Autism spectrum disorders (ASDs) affect approximately 1 percent of the worldwide population and are associated with cognitive deficits in perception, social interaction and communication; these functions are all …
  37. Role of autism risk genes in prefrontal circuits underlying social processing in mice

    Funded Work
    Social processing has been established as one of the six trans-diagnostic core domains (according to the Research Domain Criteria framework) of neuropsychiatric disorders, including autism spectrum disorders …
  38. Impact of maternal serotonin levels on neurodevelopment

    Funded Work
    Jeremy Veenstra-VanderWeele and colleagues previously demonstrated in mice that the maternal serotonin transporter (SERT) Ala56 genotype — but not embryo genotype — affected placental and forebrain serotonin (5-HT …
  39. Auditory hypersensitivity and circuit disruptions in a rat model of fragile X syndrome

    Funded Work
    Converging evidence from human and animal studies have identified cellular and molecular disruptions that are central to the pathophysiology of autism spectrum disorders (ASDs).
  40. In vivo calcium dynamics in dendritic spines of Shank3 and Scn2a mutant mouse models of autism

    Funded Work
    A central feature of autism spectrum disorder (ASD) that has emerged from converging lines of evidence is dendritic spine pathology.
  41. Computationally modeling large-scale neural dynamics in autism using existing neuroimaging and transcriptomic datasets

    Funded Work
    Noninvasive neuroimaging, such as functional magnetic resonance imaging (fMRI), has provided insights into dysfunction of large-scale neural systems in autism spectrum disorder (ASD) and its relationship to …
  42. Role of the autism risk gene Scn2a in oligodendrocyte-mediated myelination and circuit development

    Funded Work
    Autism is a neurodevelopmental disorder associated with deficits in social behaviors and characteristic repetitive behaviors.
  43. Mobile genetic elements in autism spectrum disorder

    Funded Work
    Recent years have seen major strides in our understanding of the complex genetics of autism spectrum disorder (ASD).
  44. Elucidating the role of chromatin-modifying complexes in autism spectrum disorder

    Funded Work
    Genes encoding chromatin-remodeling enzymes are among the most prominent targets of de novo mutations associated with autism spectrum disorder (ASD).
  45. Modeling autism using genome engineering in human 2-D and 3-D neural systems

    Funded Work
    Autism spectrum disorders (ASDs) are complex neurodevelopmental disorders with a strong genetic component.
  46. The influence of ASD risk genes on corticostriatal circuit development and reinforcement learning

    Funded Work
    Behavior is governed by the coordination of multiple learning and memory systems.
  47. Enhancement of neurexin-1 function in a genetic mouse model: A novel approach to restore synaptic pathways disrupted in autism

    Funded Work
    Genetic data implicate two pathways most strongly in autism spectrum disorders (ASDs): synaptic networks and transcriptional regulatory pathways.
  48. Identification and functional analysis of noncoding mutations in autism

    Funded Work
    The phenotypic and genetic heterogeneity of autism spectrum disorder (ASD) has posed immense clinical and research challenges to understanding the underlying genetic determinants of ASD risk.
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