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Simons Foundation
Simons Foundation

Autism Research Initiative (SFARI)

  • Funding

    Explore open funding opportunities for autism research.

    Funding Opportunities

    Early Career Awards

    • Fellows to Faculty Award
    • Shenoy Undergraduate Research Fellowship in Neuroscience (SURFiN)

    Investigator Awards

    • New Ideas

    Symposia & Travel Awards

    • Conferences & Courses Award

    Shared Programs

    • Pivot Fellowship
    • Simons Society of Fellows

    Resource for Applying

    • Open Funding Opportunities
    • Policies & Procedures
    • Instructional Videos
    • Past Funded Work
  • Supported Work

    SFARI has supported over 750 investigators studying autism-related research.

    Research Highlights

    Research

    • SFARI Investigators
    • Funded Projects
    • Publications

    Data Access & Tools

    • SFARI Base
    • SFARI Gene

    Centers & Initiatives

    • Simons Center for the Social Brain
    • Simons Initiative for the Developing Brain

    Collaborations & Consortia

    • SFARI Sex Differences
    • Autism Rat Models Consortium
  • Resources

    Access data, biospecimens and participant cohorts through SFARI Base.

    SFARI Base

    Cohorts & Tissue Banks

    • SPARK
    • Simons Searchlight
    • Simons Simplex Collection
    • Autism BrainNet
    • Autism Inpatient Collection

    Other Resources

    • Animal Models
    • Biospecimens
    • Research Match

    Data Access & Tools

    • SFARI Base
    • SFARI Gene
    • SFARI Genomes Browser
    • Genotypes & Phenotypes in Families
  • News

    See the latest news and updates from SFARI.

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    • SFARI News
    • Research Highlights
    • Meeting & Workshop Reports
    • Funding News
  • About

    SFARI’s mission is to advance the basic science of autism and related neurodevelopmental disorders.

    About SFARI

    About SFARI

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Autism Research Initiative (SFARI) Research

Research: Funded Publications

Explore publications and preprints from SFARI-funded investigators and researchers using SFARI-supported data and resources.

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  1. Concise review: Induced pluripotent stem cell models for neuropsychiatric diseases.

    Stem Cells Transl. Med., November 30, 2017

    Adegbola A., Bury L.A., Fu C., Zhang M., and A. Wynshaw-Boris

  2. The central amygdala controls learning in the lateral amygdala.

    Nat. Neurosci., November 30, 2017

    Yu K., Ahrens S., Zhang X., Schiff H., Ramakrishnan C., Fenno L., et al.

  3. Whole genome sequencing in psychiatric disorders: the WGSPD consortium.

    Nat. Neurosci., November 30, 2017

    S. Sanders, Neale B.M., Huang H., D. Werling, An J.-Y., Dong S., et al.

  4. Recurrent de novo mutations in neurodevelopmental disorders: Properties and clinical implications.

    Genome Med., November 26, 2017

    Wilfert A.B., Sulovari A., T. Turner, Coe B.P., and E. Eichler

  5. Cellular phenotypes in human iPSC-derived neurons from a genetic model of autism spectrum disorder.

    Cell. Rep., November 23, 2017

    Desphpande A., Yadav S., Dao D.Q., Wu, Zhi-Yong, Hokanson K.C., Cahill M.K., et al.

  6. De novo variants in EBF3 are associated with hypotonia, developmental delay, intellectual disability and autism.

    Cold Spring Harb. Mol. Case Stud, November 20, 2017

    Tanaka A.J., Cho M.T., Willaert R., Retterer K., Zarate Y.A., Bosanko K., et al.

  7. Incorporating social media into your support tool box: Points to consider from genetics-based communities.

    J. Genet. Couns., November 12, 2017

    Rocha H.M., Savatt J.M., Riggs E.R., Wagner J.K., A. Faucett, C. Martin, et al.

  8. Associations between familial rates of psychiatric disorders and de novo genetic mutations in autism.

    Autism Res. Treat., November 7, 2017

    Luhrs K., Ward T., Hudac C.M., Gerdts J., H. Stessman, E. Eichler, et al.

  9. Foxp1 in forebrain pyramidal neurons controls gene expression required for spatial learning and synaptic plasticity.

    J. Neurosci., November 7, 2017

    Araujo D.J., Toriumi K., Escamilla C.O., Kulkarni A., Anderson A.G., Harper M., et al.

  10. Temporal control of mammalian cortical neurogenesis by m6A methylation.

    Cell, November 1, 2017

    Yoon K.J., Ringeling F.R., Vissers C., Jacob F., Pokrass M., Jimenez-Cyrus D., et al.

  11. Decreased parvalbumin mRNA levels in cerebellar Purkinje cells in autism.

    Autism Res., October 31, 2017

    Soghomonian J.J., Zhang K., Reprakash S., and Blatt G.J.

  12. Subcortical brain and behavior phenotypes differentiate infants with autism versus language delay.

    Biol. Psychiatry Cogn. Neurosci. Neuroimaging, October 31, 2017

    Swanson M.R., Shen M.D., Wolff J.J., J. Elison, Emerson R.W., Styner M.A., et al.

  13. Cell biology of astrocyte-synapse interactions.

    Neuron, October 31, 2017

    Allen N.J. and C. Eroglu

  14. Contribution of rare inherited and de novo variants in 2,871 congenital heart disease probands.

    Nat. Genet., October 31, 2017

    Jin S.C., Homsy J., Zaidi S., Lu Q., Morton S., DePalma S.R., et al.

  15. Associations between family member BMI and obesity status of children with autism spectrum disorder.

    J. Dev. Behav. Pediatr., October 31, 2017

    Dempsey J., Dempsey A.G., Voigt R.G., and Monteiro S.

  16. Indexcov: fast coverage quality control for whole-genome sequencing.

    Gigascience, October 31, 2017

    Pedersen B.S., Collins R.L., M. Talkowski, and Quinlan A.R.

  17. Gene disrupting mutations associated with regression in autism spectrum disorder.

    J. Autism Dev. Disord., October 31, 2017

    R. Goin-Kochel, Trinh S., Barber S., and R. Bernier

  18. Interactive effects of prenatal antidepressant exposure and likely gene disrupting mutations on the severity of autism spectrum disorder

    J. Autism Dev. Disord., October 31, 2017

    Ackerman S., Schoenrbun S., Hudac C., and R. Bernier

  19. Critical region within 22q11.2 linked to higher rate of autism spectrum disorder.

    Mol. Autism, October 26, 2017

    Clements C.C., Wenger T.L., Zoltowski A.R., Bertollo J.R., Miller J.S., de Marchena A.B., et al.

  20. Brainwide mapping of endogenous serotonergic transmission via chemogenetic-fMRI.

    Cell Reports, October 23, 2017

    Giorgi A., Migliarini S., Gritti M., Galbusera A., Maddaloni G., De Luca M.A., et al.

  21. Genomic patterns of de novo mutation in simplex autism.

    Cell, October 18, 2017

    T. Turner, Coe B.P., Dickel D.E., Hoekzema K., Nelson B.J., Zody M.C., et al.

  22. Foxp1 regulation of neonatal vocalizations via cortical development.

    Genes. Dev., October 14, 2017

    Usui N., Araujo D.J., Kulkarni A., Co M., Ellegood J., Harper M., et al.

  23. Neuronal overexpression of Ube3a isoform 2 causes behavioral impairments and neuroanatomical pathology relevant to 15q11.2-q13.3 duplication syndrome.

    Hum. Mol. Genet., October 14, 2017

    Copping N.A., Christian S.G.B., Ritter D.J., Islam M.S., Buscher N., Zolkowska D., et al.

  24. Native KCC2 interactome reveals PACSIN1 as a critical regulator of synaptic inhibition.

    Elife, October 12, 2017

    Mahadevan V., Khademullah C.S., Dargaei Z., Chevrier J., Uvarov P., Kwan J., et al.

  25. Preference for novel faces in male infant monkeys predicts cerebrospinal fluid oxytocin concentrations later in life.

    Sci. Rep., October 10, 2017

    Madrid J.E., Oztan O., Sclafani V., Del Rosso L.A., Calonder L.A., Chun K., et al.

  26. Beyond excitation/inhibition imbalance in multidimensional models of neural circuit changes in brain disorders.

    Elife, October 10, 2017

    C. O’Donnell, Goncalves J.T., C. Portera-Cailliau, and Sejnowski T.J.

  27. The immune signaling adaptor LAT contributes to the neuroanatomical phenotype of 16p11.2 BP2-BP3 CNVs.

    Am. J. Hum. Genet., October 4, 2017

    Loviglio M.N., Arbogast T., Jønch A.E., Collins S.C., Popadin K., Bonnet C.S., et al.

  28. Clinical phenotype of ASD-associated DYRK1A haploinsufficiency.

    Mol. Autism, October 4, 2017

    Earl R.K., T. Turner, H. Mefford, Hudac C.M., Gerdts J., E. Eichler, et al.

  29. Autism spectrum disorder: Neuropathology and animal models.

    Acta. Neuropathol., September 30, 2017

    Varghese M., Keshav N., Jacot-Descombes S., Warda T., Wicinski B., Dickstein D.L., et al.

  30. The knockout of Synapsin II in mice impairs social behavior and functional connectivity generating an ASD-like phenotype.

    Cereb. Cortex, September 30, 2017

    Michetti C., Caruso A., Pagani M., Sabbioni M., Medrihan L., David G., et al.

  31. Differences in neural correlates of speech perception in 3-month-olds at high and low risk for autism spectrum disorder.

    J. Autism Dev. Disord., September 30, 2017

    Edwards L.A., Wagner J.B., H. Tager-Flusberg, and C. Nelson

  32. A profile of auditory-responsive neurons in the larval zebrafish brain.

    J. Comp. Neurol., September 29, 2017

    Vanwalleghem G., Heap L.A., and E. Scott

  33. Gating of social reward by oxytocin in the ventral tegmental area.

    Science, September 28, 2017

    Hung, L.W., Neuner, S., Polepalli, J.S., Beier, K.T., Wright, M., Walsh, J.J., et al.

  34. Maternal gut bacteria promote neurodevelopmental abnormalities in mouse offspring.

    Nature, September 27, 2017

    Kim S., Kim H., Y. Yim, Ha S., Atarashi K., Tan T.G., et al.

  35. Reversing behavioural abnormalities in mice exposed to maternal inflammation.

    Nature, September 27, 2017

    Y. Yim, Park A., Berrios J., Lafourcade M., Pascual L.M., Soares N., et al.

  36. EEG power at three months in infants at high familial risk for autism.

    J. Neurodev. Disord., September 12, 2017

    Levin A.R., Varcin K.J., O'Leary H.M., H. Tager-Flusberg, and C. Nelson

  37. Microglia emerge as central players in brain disease.

    Nat. Med., September 7, 2017

    Salter M.W. and B. Stevens

  38. Exonic mosaic mutations contribute risk for autism spectrum disorder.

    Am. J. Hum. Genet., September 6, 2017

    Krupp D.R., Barnard R.A., Duffourd Y., Evans S.A., Mulqueen R.M., R. Bernier, et al.

  39. Feasibility of conducting autism biomarker research in the clinical setting.

    J. Dev. Behav. Pediatr., August 31, 2017

    Sices L., Pawlowski K., Farfel L., Phillips D., Howe Y., Cochran D.M., et al.

  40. Neural correlates of sensory hyporesponsiveness in toddlers at high risk for autism spectrum disorder.

    J. Autism Dev. Disord., August 31, 2017

    Simon D.M., Damiano C.R., Woynaroski T.G., Ibañez L.V., Murias M., Stone W.L., et al.

  41. NKCC1 chloride importer antagonists attenuate many neurological and psychiatric disorders.

    Trends Neurosci., August 31, 2017

    Y. Ben-Ari

  42. Rates, distribution and implications of postzygotic mosaic mutations in autism spectrum disorder.

    Nat. Neurosci., August 31, 2017

    Lim E.T., Uddin M., De Rubeis S., Chan Y., Kamumbu A.S., Zhang X., et al.

  43. Placebo-like response in absence of treatment in children with autism.

    Autism Res., August 31, 2017

    R. Jones, Carberry C., Hamo A., and C. Lord

  44. The spatiotemporal organization of the striatum encodes action space.

    Neuron, August 29, 2017

    Klaus A., Martins G.J., Paixao V.B., Zhou P., Paninski L., and R. Costa

  45. Functional significance of rare neuroligin 1 variants found in autism.

    PLoS Genet., August 24, 2017

    Nakanishi M., Nomura J., Ji X., Tamada K., Arai T., Takahashi E., et al.

  46. High resolution measurement of DUF1220 domain copy number from whole genome sequence data.

    BMC Genomics, August 13, 2017

    Astling D.P., Heft I.E., Jones K.L., and J. Sikela

  47. Modulation of prefrontal cortex excitation/inhibition balance rescues social behavior in CNTNAP2-deficient mice.

    Sci. Transl. Med., August 1, 2017

    Selimbeyoglu A., Kim C.K., Inoue M., Lee S.Y., Hong A.S.O., Kauvar I., et al.

  48. Increased extra-axial cerebrospinal fluid in high-risk infants who later develop autism.

    Biol. Psychiatry, July 31, 2017

    Shen M.D., Kim S.H., McKinstry R.C., Gu H., H. Hazlett, Nordahl C.W., et al.

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