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Presenter: Johannes Friedrich Topic: Neuronal Gaussian Process Regression Zoom Info: Join from PC, Mac, Linux, iOS or Android: https://simonsfoundation.zoom.us/j/732630308 Or Telephone: Dial(for …

Topic: ‘Journal club (Nicholas & Shiva)’ Zoom Info: Join from PC, Mac, Linux, iOS or Android: https://simonsfoundation.zoom.us/j/732630308 Or Telephone: Dial(for higher quality, dial …

Due to Dr. Pilar Cossio’s limited internet connection this seminar has been pre-recorded. The Q&A segment will be live from 2:45 – 3:15pm. 2 …

Candidate: Wenhao Zhang, University of Pittsburg Topic: Linking Theories of Computation with Neural Circuits in the Brain The main goal of my research is bridging the abstract theories …

… a number based on your current location): US: +1 646 558 8656 or +1 669 900 6833 Meeting ID: 752 878 068 International numbers available: https://simonsfoundation …

Cosyne recap Zoom Info: Every Thursday, until May 28, 2020, 12 occurrence(s) Join from PC, Mac, Linux, iOS or Android: https://simonsfoundation.zoom.us/j/732630308 Or …

Zoom Talk Zoom details: Join from PC, Mac, Linux, iOS or Android: https://simonsfoundation.zoom.us/j/313997163 Or H.323 room system: 162.255.36.11 (US …

Presenter: Jamie Morton, Ph.D., Flatiron Fellow, Systems Biology Title: Biological sequence alignments from language representations Computing sequence similarity is a fundamental task in biology, with alignment forming …

Presenter: Thomas Fai, Ph.d., Brandeis University Topic: Fluid Mechanics of Vesicle Transport into Dendritic Spines We model the fluid dynamics of vesicle transport into dendritic spines, which …

Speaker: Yonatan Loewenstein, Associate Professor, Edmond & Lily Safra Center for Brain Sciences, The Hebrew University of Jerusalem Topic: Choice bias as a window to the microscopic dynamics of …

Title: Understanding how genetics and environment influences cells through images and gene expression data Abstract: A central goal of single-cell genomics is to understand how cells interact …

Speaker: Reza Farhadifar, Ph.D., Research Scientist, Biophysical Modeling Topic: How cells regulate the size of their structures The size of intracellular structures such as the nucleus, Golgi …

Presenter: Alex Chamolly, Ph.D., Unversity of Cambridge Topic: Propulsion, navigation, and control of biological and artificial microswimmers In this talk, I will describe some of the topics …

Presenter: Laura Miller, Ph.D., University of North Carolina at Chapel Hill Topic: The dispersal of aerial plankton: Spider ballooning and flapping with bristled wings A vast body …

Presenter: James Eastwood, Ph.D. Candidate, New York University Topic: Designing Peptoid Macrocycles to Inhibit Protein-Protein Interactions Many biological processes are mediated by protein-protein interactions, which …

Presenter: Gokberk Kabacaoglu, Ph.D. Topic: Black-box optimization algorithm: CMA-ES

Topic: Data-driven insights into cancer: from machine learning methods to biological discoveries Abstract: The recent deluge of genomics data has transformed biological research from a field limited …

… spindle assembly. His research is/was supported by NIH and NSF grants, Army Office of Research and by United States-IsraelBinational Science Foundation. Alex served on editorial …

Speakers: Charlie Windolf, David Lipshutz, Siavash Golkar Topic: Slow feature analysis update and discussion

Guest Presenter: Daniel B. Forger III, Ph.D. Professor of Mathematics Research Professor of Computational Medicine and Bioinformatics Michigan Institute for Data Science Core Faculty University of Michigan …

Guest Presenter: Stefania Giacomello, Ph.D., LifeSciLab Topic: Development and application of spatial genomics to diverse plant species: progress and prospects

Speaker: Jason Moore, Ph.D., Postdoctoral Fellow, Basu Lab, NYU School of Medicine Topic: “Algorithmic Segmentation of Dendrites in Mouse Hippocampus” Dendrites support non-linear integration of synaptic …

… high-quality results as the popular offline approaches, but outperform them with regard to computing time and memory requirements. Our algorithms enable faster and scalable analysis, and …

Presenter: Aidan Daly, Research Fellow, Systems Biology Topic: Image registration techniques for processing spatial multi-omics data Abstract: Recently developed techniques for generating spatially-resolved measurements of the …

Speaker: Shiva Farashahi Topic: “Semi-supervised clustering model of olfaction for odor-associative learning”

Alex Hornstein grew up with a soldering iron in one hand and a butterfly net in the other.  Later on, he went to MIT to study electrical engineering …

Speaker: Nicholas Chua Topic: Update on lamina manuscript

Speakers: Anirvan Sengupta, Mitya Chklovskii, Siavash Golkar, Yanis Bahroun Topic: NeurIPS recap

Topic: Hydrodynamically-coupled oscillators in biofluids. Abstract: Respiratory cilia that transport mucus in the lungs, spermatozoa that collectively move through the female reproductive tract, paddling appendages that propel …

Title: Biological thought experiments and thecomputations they spawn Abstract: Iwill talk about aspirations that bridge biology and computation. The first is determiningthe landscape of genetic contribution to autism …

Speaker: Aidan Daly Topic: Deep learning methods for tissue registration

Presenter: Phillip Epple Topic: Numerical simulation of two tandem heaving airfoils NACA0012

Topic: Improvements in the VIPUR prediction pipeline Gene products such as proteins can vary due to DNA coding, transcriptional, or translational errors. While some protein variants may have …

Speaker: Shiva GhaaniFarashahi Topic: Understanding the learning and memory circuit in an insect brain

… December 4, 2019 Universality – Turbulence Across Vast Scales: Day 3, Session 4 December 5, 2019 Universality – Turbulence Across Vast Scales: Day 4, Session 1 December 5, 2019 …

Topic: Modeling Structure in Single-cell Chromatin Data. In recent years, single-cell technologies have revolutionized biology, providing exciting opportunities to map cellular populations through development. Among these …

Speaker: Nikolai Chapochnikov Topic: Presentation of figures for the paper: “Mechanistic model for ZCA-type whitening in the olfactory circuit of the drosophila larva