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  • Founded by Jim and Marilyn Simons, we’re a private philanthropy advancing mathematics and basic science.

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Bringing people and ideas together to fund, conduct, and share transformative science.

Our grants advance knowledge and strengthen connections between science and society.

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Founded by Jim and Marilyn Simons, we’re a private philanthropy advancing mathematics and basic science.

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The Flatiron Institute is a research center that uses computational science to advance fields like physics, biology, and astronomy.

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Featured

Dissecting mechanisms of hyperarousal in autism and related disorders using the Simons Sleep Project

Funded Work

Gravity Follows Newton’s and Einstein’s Rules, Even at Cosmic Scales

April 15, 2026

Scientists Capture Superconductivity’s ‘Dancing Pairs’ for First Time, Filling Gap in Decades-Old Theory

April 15, 2026

How SURFiN Fellowships Jump-Started These 3 Neuroscience Students’ STEM Careers

March 18, 2026

Results

  1. Using focal cooling to link neural dynamics and behavior

    Publication
    Establishing a causal link between neural function and behavioral output has remained a challenging problem. Commonly used perturbation techniques enable unprecedented control over intrinsic activity patterns and can …
  2. Anterior thalamic dysfunction underlies cognitive deficits in a subset of neuropsychiatric disease models

    Publication
    Neuropsychiatric disorders are often accompanied by cognitive impairments/intellectual disability (ID). It is not clear whether there are converging mechanisms underlying these debilitating impairments. We found that many …
  3. Preterm birth alters the development of cortical microstructure and morphology at term-equivalent age.

    Publication
  4. An Improved and Physically Motivated Scheme for Matching Galaxies with Dark Matter Halos

    Publication
    The simplest scheme for predicting real galaxy properties after performing a dark matter simulation is to rank order the real systems by stellar mass and the simulated systems …
  5. Dissecting autism and schizophrenia through neuroimaging genomics.

    Publication
  6. Multivariate genome-wide covariance analyses of literacy, language and working memory skills reveal distinct etiologies.

    Publication
  7. Cardiovascular brain impulses in Alzheimer's disease

    Publication
    Accumulation of amyloid-β is a key neuropathological feature in brain of Alzheimer's disease patients. Alterations in cerebral haemodynamics, such as arterial impulse propagation driving the (peri …
  8. Joint encoding of facial identity, orientation, gaze, and expression in the middle dorsal face area

    Publication
    The last two decades have established that a network of face-selective areas in the temporal lobe of macaque monkeys supports the visual processing of faces. Each area …
  9. A Solar System formation analogue in the Ophiuchus star-forming complex

    Publication
    Anomalies among the daughter nuclei of the extinct short-lived radionuclides (SLRs) in the calcium-aluminum-rich inclusions (CAIs) indicate that the Solar System must have been born …
  10. Phase Retrieval with Holography and Untrained Priors: Tackling the Challenges of Low-Photon Nanoscale Imaging

    Publication
    Phase retrieval is the inverse problem of recovering a signal from magnitude-only Fourier measurements, and underlies numerous imaging modalities, such as Coherent Diffraction Imaging (CDI). A variant …
  11. A characteristic optical variability time scale in astrophysical accretion disks

    Publication
    Accretion disks around supermassive black holes in active galactic nuclei produce continuum radiation at ultraviolet and optical wavelengths. Physical processes in the accretion flow lead to stochastic variability …
  12. Lévy Walks and Path Chaos in the Dispersal of Elongated Structures Moving across Cellular Vortical Flows

    Publication
    In cellular vortical flows, namely arrays of counterrotating vortices, short but flexible filaments can show simple random walks through their stretch-coil interactions with flow stagnation points. Here …
  13. Locally ordered representation of 3D space in the entorhinal cortex

    Publication
    As animals navigate on a two-dimensional surface, neurons in the medial entorhinal cortex (MEC) known as grid cells are activated when the animal passes through multiple locations …
  14. Motor training improves coordination and anxiety in symptomatic MECP2-null mice despite impaired functional connectivity within the motor circuit.

    Publication
  15. A Deep-learning Approach for Live Anomaly Detection of Extragalactic Transients

    Publication
    There is a shortage of multiwavelength and spectroscopic follow-up capabilities given the number of transient and variable astrophysical events discovered through wide-field optical surveys such as …
  16. Charging up the periphery: Glial ionic regulation in sensory perception.

    Publication
  17. Loss of Tsc1 from striatal direct pathway neurons impairs endocannabinoid-LTD and enhances motor routine learning.

    Publication
  18. Improving the measurement of alexithymia in autistic adults: A psychometric investigation of the 20-item Toronto Alexithymia Scale and generation of a general alexithymia factor score using item response theory.

    Publication
  19. Population calcium responses of Purkinje cells in the oculomotor cerebellum driven by non-visual input

    Publication
    The climbing fiber input to the cerebellum conveys instructive signals that can induce synaptic plasticity and learning by triggering complex spikes accompanied by large calcium transients in Purkinje …
  20. Targeted long-read sequencing identifies missing disease-causing variation.

    Publication
  21. Active microphase separation in mixtures of microtubules and tip-accumulating molecular motors

    Publication
    Mixtures of microtubules and molecular motors form active materials with diverse dynamical behaviors that vary based on their constituents' molecular properties. We map the non-equilibrium phase diagram …
  22. Autism spectrum disorder/intellectual disability-associated mutations in trio disrupt neuroligin 1-mediated synaptogenesis.

    Publication
  23. "Guilt by association" is not competitive with genetic association for identifying autism risk genes.

    Publication
  24. The role of the Cer1 transposon in horizontal transfer of transgenerational memory

    Publication
    Animals face both external and internal dangers: pathogens threaten from the environment, and unstable genomic elements threaten from within. C. elegans protects itself from pathogens by "reading" bacterial …
  25. Application of ensemble pharmacophore-based virtual screening to the discovery of novel antimitotic tubulin inhibitors

    Publication
    Tubulin is a well-validated target for herbicides, fungicides, anti-parasitic, and anti-tumor drugs. Many of the non-cancer tubulin drugs bind to its colchicine site but …
  26. A multiscale biophysical model gives quantized metachronal waves in a lattice of cilia

    Publication
    Motile cilia are slender, hair-like cellular appendages that spontaneously oscillate under the action of internal molecular motors and are typically found in dense arrays. These active filaments …
  27. Age-dating Red Giant Stars Associated with Galactic Disk and Halo Substructures

    Publication
    The vast majority of Milky Way stellar halo stars were likely accreted from a small number (≲3) of relatively large dwarf galaxy accretion events. However, the timing of …
  28. Age-dating Red Giant Stars Associated with Galactic Disk and Halo Substructures

    Publication
    The vast majority of Milky Way stellar halo stars were likely accreted from a small number (≲3) of relatively large dwarf galaxy accretion events. However, the timing of …
  29. Multi-omic profiling of primary mouse neutrophils predicts a pattern of sex and age-related functional regulation

    Publication
    Neutrophils are the most abundant human white blood cell and constitute a first line of defense in the innate immune response. Neutrophils are short-lived cells, and thus …
  30. Predictive encoding of motion begins in the primate retina

    Publication
    Predictive motion encoding is an important aspect of visually guided behavior that allows animals to estimate the trajectory of moving objects. Motion prediction is understood primarily in the …
  31. A database and deep learning toolbox for noise-optimized, generalized spike inference from calcium imaging

    Publication
    Inference of action potentials ('spikes') from neuronal calcium signals is complicated by the scarcity of simultaneous measurements of action potentials and calcium signals ('ground truth'). In this study …
  32. Decoding disease: from genomes to networks to phenotypes

    Publication
    Interpreting the effects of genetic variants is key to understanding individual susceptibility to disease and designing personalized therapeutic approaches. Modern experimental technologies are enabling the generation of massive …
  33. Paradoxical hyperexcitability from NAV1.2 sodium channel loss in neocortical pyramidal cells.

    Publication
  34. Scn2a severe hypomorphic mutation decreases excitatory synaptic input and causes autism-associated behaviors

    Publication
  35. Improving MP2 bandgaps with low-scaling approximations to EOM-CCSD

    Publication
  36. Interplay between breathing-mode distortions and magnetic order in rare-earth nickelates from ab initio magnetic models

    Publication
  37. Hartree-Fock study of the moiré Hubbard model for twisted bilayer transition metal dichalcogenides

    Publication
  38. Machine learning band gaps from the electron density

    Publication
  39. COP-E-CAT: Cleaning and Organization Pipeline for EHR Computational and Analytic Tasks

    Publication
    In order to ensure that analyses of complex electronic healthcare record (EHR) data are reproducible and generalizable, it is crucial for researchers to use comparable preprocessing, filtering, and …
  40. Neurodevelopmental phenotypes in individuals with pathogenic variants in CHAMP1.

    Publication
  41. Availability of services and caregiver burden: Supporting individuals with neurogenetic conditions during the COVID-19 pandemic.

    Publication
  42. Computational methods to measure patterns of gaze in toddlers with autism spectrum disorder.

    Publication
  43. Associations between social camouflaging and internalizing symptoms in autistic and non-autistic adolescents.

    Publication
  44. Differential effects by sex with Kmt5b loss.

    Publication
  45. Towards a data driven approach to screen for autism risk at 12 months of age.

    Publication
  46. Sensory coding and the causal impact of mouse cortex in a visual decision

    Publication
    Correlates of sensory stimuli and motor actions are found in multiple cortical areas, but such correlates do not indicate whether these areas are causally relevant to task performance …
  47. Dynamic and reversible remapping of network representations in an unchanging environment

    Publication
    Neurons in the medial entorhinal cortex alter their firing properties in response to environmental changes. This flexibility in neural coding is hypothesized to support navigation and memory by …
  48. Recent ultra-rare inherited variants implicate new autism candidate risk genes.

    Publication
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