Publications

Read the latest papers published by our research teams.

  1. Characterizing chromatin landscape from aggregate and single-cell genomic assays using flexible duration modeling

    Nature Communications, February 6, 2020

    Mariano Gabitto, Anders Rasmussen, O Wapinksi, K Allaway, Nick Carriero, G Fishell, et al.

  2. Modular Arithmetic with Nodal Lines: Drumhead Surface States in ZrSiTe

    Physical Review X, arXiv:1909.02154, February 6, 2020

    Lukas Muechler, Andreas Topp, Raquel Queiroz, Maxim Krivenkov, Andrei Varykhalov, Jennifer Cano, et al.

  3. BreakBRD Galaxies. I. Global Properties of Spiral Galaxies with Central Star Formation in Red Disks

    APJ, arXiv:1912.02829, February 5, 2020

    Sarah E. Tuttle and Stephanie Tonnesen

  4. A Hybrid Deep Learning Approach to Cosmological Constraints From Galaxy Redshift Surveys

    APJ, arXiv:1909.10527, February 3, 2020

    Michelle Ntampaka, Daniel J. Eisenstein, Sihan Yuan, and Lehman H. Garrison

  5. Covalent C–N Bond Formation through a Surface Catalyzed Thermal Cyclodehydrogenation

    arxiv:, February 1, 2020

    Ilya Piskun, Raymond Blackwell, Joaquim Jornet-Somoza, Fangzhou Zhao, Angel Rubio, Steven G. Louie, et al.

  6. Attosecond timing of the dynamical Franz–Keldysh effect

    arxiv:, February 1, 2020

    M Lucchini, S A Sato, F Schlaepfer, K Yabana, L Gallmann, Angel Rubio, et al.

  7. High-order discretization of a stable time-domain integral equation for 3D acoustic scattering

    Journal of Computational Physics, arxiv:1904.00076, February 1, 2020

    Alex H. Barnett, Leslie Greengard, and Thomas Hagstrom

  8. Strong and Fragile Topological Dirac Semimetals with Higher-Order Fermi Arcs

    Nature Communications, arXiv:1908.00016, January 31, 2020

    Benjamin J. Wieder, Zhijun Wang, Jennifer Cano, Xi Dai, Leslie M. Schoop, Barry Bradlyn, et al.

  9. Reducing bias and variance for CTF estimation in single particle cryo-EM

    UCC, January 29, 2020

    Ayelet Heimowitz, Joakim Andén, and Amit Singer

  10. Measurement of Void Bias Using Separate Universe Simulations

    The Astrophysical Journal, arxiv:1909.03736, January 29, 2020

    Kwan Chuen Chan, Yin Li, Matteo Biagetti, and Nico Hamaus

  11. An image of the dust sublimation region in the nucleus of NGC 1068

    AA, arXiv:1912.01361, January 28, 2020

    GRAVITY Collaboration, et al.

  12. Cryo-EM reconstruction of continuous heterogeneity by Laplacian spectral volumes

    Inverse Problems, arxiv:1907.01898, January 28, 2020

    Amit Moscovich, Amit Halevi, Joakim Andén, and Amit Singer

  13. Factorization of the translation kernel for fast rigid image alignment

    Inverse Problems, arxiv:1905.12317, January 28, 2020

    Aaditya V. Rangan, Marina Spivak, Joakim Andén, and Alex H. Barnett

  14. Observation of high-temperature quantum anomalous Hall regime in intrinsic MnBi2Te4/Bi2Te3 superlattice

    arXiv:2001.10579, January 28, 2020

    Haiming Deng, Zhiyi Chen, Agnieszka Wolos, Marcin Konczykowski, Kamil Sobczak, Joanna Sitnicka, et al.

  15. Gene regulatory network reconstruction using single-cell RNA sequencing of barcoded genotypes in diverse environments

    eLife, January 27, 2020

    C Jackson, D Castro, G Saldi, Richard Bonneau, and D Gresham

  16. Electromagnetic coupling in tight-binding models for strongly correlated light and matter

    arXiv:2001.09726, 2020

    Jiajung Li, Denis Golež, Giacomo Mazza, Andrew Millis, Antoine Georges, and Martin Eckstein

  17. A Multi-Scale Tensor Network Architecture for Classification and Regression

    arxiv:2001.08286, 2020

    Justin Reyes and Edwin Miles Stoudenmire

  18. A topological classification of molecules and chemical reactions with a perplectic structure

    Phys. Rev. B, arxiv:1812.08814, January 22, 2020

    Lukas Muechler

  19. A Comprehensive Map of the Monocyte-Derived Dendritic Cell Transcriptional Network Engaged upon Innate Sensing of HIV

    Cell Reports, January 21, 2020

    J Johndon, N De Veaux, A Rives, X Lahaye, S Lucas, B Perot, et al.

  20. Light-matter interactions within the Ehrenfest–Maxwell–Pauli–Kohn–Sham framework: fundamentals, implementation, and nano-optical applications

    Advances in Physics, January 21, 2020

    René Jestädt, Michael Ruggenthaler, Micael J. T. Oliveira, Angel Rubio, and Heiko Appel

  21. Strong Spin-Orbit Quenching via the Product Jahn-Teller Effect in Neutral Group IV Artificial Atom Qubits in Diamond

    arXiv:2001.07743, January 21, 2020

    C. J. Ciccarion, Johannes Flick, I. B. Harris, M. E. Trusheim, D. R. Englund, and P. Narang

  22. Crescent states in charge-imbalanced polariton condensates

    arXiv:2001.07726, January 21, 2020

    Artem Strashko, F.M. Marchetti, A.H. MacDonald, and J. Keeling

  23. Predicting Ligand-Dissociation Energies of 3d Coordination Complexes with Auxiliary-Field Quantum Monte Carlo

    arXiv:2001.07261, January 20, 2020

    Benjamin Rudshteyn, Dilek Coskun, John L. Weber, Evan J. Arthur, Shiwei Zhang, David R. Reichman, et al.

  24. A self-consistent method to estimate the rate of compact binary coalescences with a Poisson mixture model

    CQG, arXiv:1903.06881, January 16, 2020

    Shasvath J. Kapadia, et al.

  25. Automatic Contraction of Unstructured Tensor Networks

    SciPost Physics, arXiv:1709.03080, January 15, 2020

    Adam Jermyn

  26. Exact exchange-correlation potential of effectively interacting Kohn-Sham systems

    Physical Review A, arXiv:1907.00183, January 15, 2020

    Shunsuke A. Sato and Angel Rubio

  27. Photo-molecular high temperature superconductivity

    arXiv:2001.05389, January 15, 2020

    M. Buzzi, D. Nicoletti, M. Fechner, N. Tancogne-Dejean, M. A. Sentef, Antoine Georges, et al.

  28. Super-exchange mechanism and quantum many body excitations in the archetypal hemocyanin/tyrosinase di-Cu oxo-bridge

    Communications Physics, arXiv:1811.05739, January 13, 2020

    Mohamed Ali al-Badri, Edward Linscott, Antoine Georges, Daniel J. Cole, and Cédric Weber

  29. Negative absolute conductivity in photoexcited metals

    Physical Review B, arXiv:1910.10044, January 13, 2020

    Giuliano Chiriacò, Andrew J. Millis, and Igor L. Aleiner

  30. Collective modes and THz near field response of superconductors

    arXiv:2001.03704, January 11, 2020

    Zhiyuan Sun, M. M. Fogler, D. N. Basov, and Andrew J. Millis

  31. Special topic on dynamics of open quantum systems

    J. Chem. Phys., January 10, 2020

    Timothy Berkelbach and M. Thoss

  32. Comparative study of nonequilibrium insulator-to-metal transitions in electron-phonon systems

    Physical Review B, arXiv:1810.01598, 2020

    Sharareh Sayyad, Rok žitko, Hugo Strand, Philipp Werner, and Denis Golež

  33. Perspective maximum likelihood-type estimation via proximal decomposition

    EJS, January 8, 2020

    Patrick L Combettes and Christian Müller

  34. Imaginary-time matrix product state impurity solver in a real material calculation: Spin-orbit coupling in Sr2RuO4

    Phys. Rev. B (Rapid Commun.), arXiv:1909.02503, January 6, 2020

    N.-O. Linden, Manuel Zingl, C. Hubig, Olivier Parcollet, and U. Schollwöck

  35. Strongly correlated materials from a numerical renormalization group perspective: How the Fermi-liquid state of Sr2RuO4 emerges

    Phys. Rev. Lett., arXiv:1909.02389, January 2, 2020

    F. B. Kugler, Manuel Zingl, Hugo Strand, S.-S. B. Lee, J. von Delft, and Antoine Georges

  36. A balanced state consistent with planetary-scale motion for quasi-geostrophic dynamics

    Tellus A: Dynamic Meteorology and Oceanography, 2020

    Woosok Moon and James Cho

  37. Deep learning for automated classification and characterization of amorphous materials

    Soft Matter, 2020

    Kirk Swanson, Shubhendu Trivedi, Joshua Lequieu, Kyle Swanson, and Risi Kondor

  38. Universal slow plasmons and giant field enhancement in atomically thin quasi-two-dimensional metals

    arxiv:, 2020

    Felipe H. Jornada, Lede Xian, Angel Rubio, and Steven G. Louie

  39. Neuronal Gaussian Process Regression

    Advances in Neural Information Processing Systems 33, NIPS Proceedings, 2020

    Johannes Friedrich

  40. A fast boundary integral method for high-order multiscale mesh generation

    SISC, arXiv:1909.13356, January 1, 2020

    Felipe Vico, Leslie Greengard, Michael O'Neil, and Manas Rachh

  41. Kymatio: Scattering Transforms in Python

    Journal of Machine Learning Research, arxiv:1812.11214, January 1, 2020

    Mathieu Andreux, Tomás Angles, Georgios Exarchakis, Roberto Leonarduzzi, Gaspar Rochette, Louis Thiry, et al.

  42. A fast solver for the narrow capture and narrow escape problems in the sphere

    Journal of Computational Physics, arxiv:1906.04209, January 1, 2020

    Jason Kaye and Leslie Greengard

  43. Cosmological simulation in tides: power spectrum and halo shape responses, and shape assembly bias

    arXiv e-prints, arxiv:2011.06584, 2020

    Kazuyuki Akitsu, Yin Li, and Teppei Okumura

  44. Superconducting optical response of photodoped Mott insulators

    arxiv.org:2001.00184, 2020

    J. Li, Denis Golež, P. Werner, and M. Eckstein

  45. Not all doped Mott insulators have a pseudogap: key role of van Hove singularities

    arXiv:2001.00019, December 31, 2019

    Wei Wu, Mathias S. Scheurer, Michel Ferrero, and Antoine Georges

  46. Partial lattice defects in higher order topological insulators

    Physical Review Letters, arXiv:1809.03518, December 27, 2019

    Raquel Queiroz, Ion Cosma Fulga, Nurit Avraham, Haim Beidenkopf, and Jennifer Cano

  47. Disentangling microbial associations from hidden environmental and technical factors via latent graphical models

    bioRxiv:2019.12.21.885889, December 23, 2019

    Zachary D Kurtz, Richard Bonneau, and Christian Müller

  48. How to measure the entropy of a mesoscopic system via thermoelectric transport

    Nature Communications, arXiv:1904.08948, December 20, 2019

    Yaakov Kleeorin, Holger Thierschmann, Hartmut Buhmann, Antoine Georges, Laurens W. Molenkamp, and Yigal Meir