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  • Founded by Jim and Marilyn Simons, we’re a private philanthropy advancing mathematics and basic science.

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Bringing people and ideas together to fund, conduct, and share transformative science.

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Founded by Jim and Marilyn Simons, we’re a private philanthropy advancing mathematics and basic science.

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The Flatiron Institute is a research center that uses computational science to advance fields like physics, biology, and astronomy.

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Featured

Dissecting mechanisms of hyperarousal in autism and related disorders using the Simons Sleep Project

Funded Work

Gravity Follows Newton’s and Einstein’s Rules, Even at Cosmic Scales

April 15, 2026

Scientists Capture Superconductivity’s ‘Dancing Pairs’ for First Time, Filling Gap in Decades-Old Theory

April 15, 2026

How SURFiN Fellowships Jump-Started These 3 Neuroscience Students’ STEM Careers

March 18, 2026

Results

  1. Elucidating the role of rare variants in genetic architecture of autism and genetic diagnosis through the lens of natural selection

    Funded Work
    Autism as a neurodevelopmental disorder causes significant reduction in reproductive rate among affected individuals.
  2. Investigating genetic burden between autistic individuals and their siblings

    Funded Work
    Autism is a genetically heterogeneous condition, with contributions from de novo variants, inherited rare variants, and polygenic common variation.
  3. Harnessing new discoveries in infant genetics to deliver innovations in understanding autism

    Funded Work
    Autism is a highly heritable condition that emerges during infancy and toddlerhood, a fundamental period for brain development in all children.
  4. How does common polygenic variation create risk for autism?

    Funded Work
    Most genetic risk for autism reflects the aggregate activity of thousands of common genetic differences distributed throughout the genome.
  5. Modeling the gene regualtory effects of structural variants in autism

    Funded Work
    This project combines deep learning models of gene regulation with the whole-genome sequences (WGS) and phenotypes of the SPARK cohort to test the hypothesis that de novo …
  6. Trisomy rescues and mosaic chromosomal alterations in autism spectrum disorder

    Funded Work
    Trisomy rescue, a process in which somatic cell divisions correct zygotic trisomies by discarding an extra chromosome, can generate mosaic chromosomal abnormalities with profound consequences for neurodevelopment.
  7. Functionally informed model for de novo coding mutations in autism

    Funded Work
    De novo protein coding mutations are a major contributor to autism, and the characterization of these mutations is a major goal of SPARK and other large-scale genetic …
  8. Abnormal sleep oscillations in relation to disturbed sleep in adolescents with autism and their siblings

    Funded Work
    Sleep disturbances, primarily insomnia (difficulty initiating or maintaining sleep), are reported in up to 80 percent of children with autism spectrum disorder (ASD).
  9. The hidden genome: Repetitive DNA in autism spectrum disorders

    Funded Work
    Autism spectrum disorder (ASD) has a complex genetic architecture, yet a significant fraction of cases remain unexplained.
  10. The contribution of functional non-coding variants in glutamatergic neurons to autism

    Funded Work
    Despite the use of genome-wide sequencing, families who present to genetics clinics seeking to understand the cause of the autism or intellectual disability (ID) in their family …
  11. Identification of protein interaction interfaces disrupted in autism through structural analysis of exome-sequencing data

    Funded Work
    While hundreds of autism risk genes have been identified through analysis of de novo variants in probands with autism, understanding of the molecular mechanisms underlying these genetic contributions …
  12. Quantitative co-profiling of social behavior across species to identify conserved phenotypic elements of autism

    Funded Work
    An open question in brain disorder research is whether behavioral phenotypes in animal models are conserved across species.
  13. Integrating deep learning with splicing-QTL and splicing-TWAS to uncover hidden causal variants in autism spectrum disorders

    Funded Work
    Autism spectrum disorder (ASD) remains largely unexplained at the molecular level, with whole-exome and whole-genome sequencing (WES/WGS) offering relatively low diagnostic yield.
  14. Public Events

    Public Series Presidential Lectures Presidential Lectures are a series of free public colloquia spotlighting groundbreaking research across four themes: neuroscience and autism science, physics, biology, and mathematics and …
  15. Beetles Steal the Scent of Ants To Secretly Live Among Them

    National Geographic
    The catch? Once they enter the any colony, the beetles can never leave.
  16. GPT‑5.2 Derives a New Result in Theoretical Physics

    OpenAI
    In a new preprint, GPT‑5.2 proposed a formula for a gluon amplitude later proved by an internal OpenAI model and verified by the authors.
  17. How the Brain and AI Reuse Old Knowledge in New Situations

    Kempner Institute
    A study published in the journal Nature Neuroscience reveals that the geometry of brain activity patterns determines how well knowledge transfers to new situations, and presents a single …
  18. Altered Corticotectal Circuitry Shapes Contextual Sensory Processing in a Mouse Model of Autism

    April 6, 2026
    … learning-related differences in sensory function. By revealing how disrupted cortical–midbrain communication interferes with the flexible interpretation of environmental cues, this work offers a framework for …
  19. 2026 SFARI Sex Differences Collaborations Announced

    April 2, 2026
    These awards support interdisciplinary research into the sex bias associated with autism and its underlying biological mechanisms.
  20. In the Path of Totality

    Series
    What connects Bloomington, Indiana to Buffalo, New York? Or Austin, Texas to Akron, Ohio? At a surface level, it may not be much. But for a few minutes …
  21. Defining the cellular and anatomic identity and developmental trajectory of sex-differential subcortical cells and circuits in ASD

    Funded Work
    The biological basis of the sex bias in autism (ASD) remains unclear.
  22. Introducing ROCKET: An Upgrade to AlphaFold That Learns From Raw Experimental Data

    April 1, 2026
    The tool extends the capabilities of AlphaFold — a Nobel Prize–winning AI that predicts how proteins fold — by directly learning from raw experimental data.
  23. Analysis of mechanisms underlying sex epistasis in autism

    Funded Work
    In young children, ASD is diagnosed approximately four times more frequently in boys than girls, yet the underlying mechanism for this sex skewing is unclear.
  24. Xi, Y and the male bias in autism

    Funded Work
    Males are four times as likely as females to be diagnosed with autism, and females require significantly more autosomal genetic risk to manifest autism.
  25. Genetic and molecular dissection of autism sex differences

    Funded Work
    Autism genetics research faces two major challenges: understanding the higher male:female ratio in non-syndromic autism and finding the genetic basis for the 70% of non-syndromic …
  26. Using the Linear References From the Pangenome To Discover Missing Autism Variants

    April 1, 2026
    … SVs4, making it difficult to identify those relevant to disease. Comparing variants within families and against hundreds of long-read reference pangenomes allowed the team to filter …
  27. Characterization of sex differences in autism by polygenic clustering

    Funded Work
    Previous research has found large differences in ASD sex ratios by age of diagnosis.
  28. Climate Change May Produce ‘Fast-Food’ Phytoplankton

    MIT News
    With warmer ocean temperatures, the composition of marine plankton could shift from protein-rich to carb-heavy, a new study suggests.
  29. Scientists Map Aging Across the Body of a Short-Lived Fish

    March 30, 2026
    A new atlas of aging in the killifish tracks how organs change over time, revealing processes implicated in Alzheimer’s and Parkinson’s diseases. The study also creates …
  30. Hopi Hoekstra Joins Simons Foundation Board of Trustees

    March 25, 2026
    … and commitment to the foundation’s mission.
  31. How SURFiN Fellowships Jump-Started These 3 Neuroscience Students’ STEM Careers

    March 18, 2026
    … Cerbo about the broad array of technologies needed to understand neuroscience. At the time, “I found myself really drawn to the different techniques and protocols to better …
  32. Age at Autism Diagnosis Linked to Distinct Genetic Profiles

    March 11, 2026
    Recent SFARI-funded research challenges the idea that autism represents a single condition driven by a uniform set of genetic risk factors. Instead, the results support a developmental …
  33. Applications Open for 2026–2027 Undergraduate Research Fellowships in Neuroscience

    March 10, 2026
    The Simons Foundation is now accepting applications from undergraduate students to participate in its Shenoy Undergraduate Research Fellowship in Neuroscience (SURFiN) program for the 2026–2027 academic year …
  34. Choroid Plexus Secretion Regulates CSF Proteome and Alters Brain Development

    March 5, 2026
    SFARI-funded research demonstrates that activating serotonergic 5HT2c receptors leads to an increase in intracellular calcium, early-response gene expression and elevated protein secretion into cerebrospinal fluid.
  35. Teresa Huang: Bridging Science and Machine Learning at Cosmic Scales

    March 4, 2026
    Huang explores how symmetries and structure can help reveal new insights into the universe, aiding discovery in everything from cosmology to the development of fusion energy.
  36. Applications for Conferences and Courses Awards in Neuroscience Now Open

    March 4, 2026
    … PAG-organized conference, you can explore the Conference Grant Support for Rare Neurodevelopmental Disorder Communities Participating in Simons Searchlight RFA. Applicants must submit a letter of intent …
  37. Applications Open for Next Class of Pivot Fellows

    March 2, 2026
    The Simons Foundation is now accepting applications for the next class of Pivot Fellows, offering a unique opportunity for researchers ready to bring their expertise to a new …
  38. How the Brain and AI Reuse Old Knowledge in New Situations

    Kempner Institute
    A new study reveals that the geometry of brain activity patterns determines how well knowledge transfers to new situations, and presents a single mathematical formula that captures this …
  39. Simons Foundation’s Infinite Sums Initiative Celebrates Pi Day in Brooklyn and Across the US

    February 25, 2026
    The Simons Foundation is supporting events nationwide and co-producing an event with the Brooklyn Public Library featuring a keynote by filmmaker Werner Herzog.
  40. New Series from Quanta Magazine Explores the Infinite Evolution of Math

    February 25, 2026
    … that Quanta has released over the last two years. September 2024’s “The Unraveling of Space-Time” received the National Magazine Award for Best Single-Topic Issue …
  41. Simons Foundation

    The Simons Foundation We’re a philanthropic organization dedicated to advancing the frontiers of math and basic science through grantmaking, in-house research and public engagement.
  42. Flatiron Institute

    We leverage advanced computational methods, open-source tools and deep collaboration to power scientific research into everything from neurons to galaxy clusters.
  43. Media Relations

    Media Contact Journalists with inquiries about the Simons Foundation, the Flatiron Institute or who need help finding a subject-matter expert can email us at [email protected] …
  44. About

    Mission and Model The Simons Foundation’s mission is to advance the frontiers of research in mathematics and the basic sciences. Since its founding in 1994 by Jim …
  45. Styleguide

    Blocks
  46. Bringing the Power of the Sun to Earth

    February 18, 2026
    Nuclear fusion reactors hold the promise of abundant, low-emission energy, but many obstacles remain before they will be viable for practical use. Since its inception in 2018 …
  47. New Cohort of Triangle Program Awardees Will Explore Symmetry Through Art

    February 17, 2026
    Meet the artists, scientists, and arts organizations selected to produce new artworks in connection with the Simons Foundation’s Infinite Sums initiative.
  48. GPT‑5.2 Derives a New Result in Theoretical Physics, OpenAI

    In the News
    A new preprint shows that a type of particle interaction many physicists expected would not occur can in fact arise under specific conditions. The work focuses on gluons …
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