162
Publications
The Genetic Landscape of a Cell
M. Costanzo, A. Baryshnikova , J. Bellay , Y. Kim, E. Spear , C. Sevier , H. Ding , J. Koh , K. Toufighi, S. Mostafavi , J. Prinz , R. St Onge , Benjamin VanderSluis, Ph.D., T. Makhnevych , F. Vizeacoumar , S. Alizadeh , S. Bahr , R. Brost , Y. Chen , M. Cokol , R. Deshpande , Z. Li , Z. Lin, W. Liang , M. Marback , J. Paw , B. San Luis , E. Shuteriqi , A. Tong, N. van Dyk , I. Wallace, J. Whitney, M. Weirauch , G. Zhong , H. Zhu, W. A. Houry, M. Brudno, S. Ragibizadeh, B. Papp, C. Pál, F. Roth, G. Giaever, C. Nislow, O. Troyanskaya, H. Bussey, G. Bader, A-C. Gingras, Q. Morris, P. Kim, C. Kaiser, C. Myers, B. Andrews, C. Boone
Detailing Regulatory Networks through Large Scale Data Integration
C. Huttenhower, K. Mutungu, N. Indik, W. Yang, M. Schroeder, J. Forman, O. Troyanskaya, H. Coller
Graphle: Interactive Exploration of Large, Dense Graphs
C. Huttenhower, S. Mehmood, O. Troyanskaya
Systems-Level Dynamic Analyses of Fate Change in Murine Embryonic Stem Cells
R. Lu, F. Markowetz, R. Unwin , J. Leek , E. Airoldi , B. MacArthur , A. Lachmann , R. Rozov , A. Ma'ayan , L. Boyer , O. Troyanskaya, A. Whetton, I. Lemischka
The Impact of Incomplete Knowledge on Evaluation: An Experimental Benchmark for Protein Function Prediction
C. Huttenhower, M. Hibbs , C. Myers, A. Caudy , D. Hess, O. Troyanskaya
Global Prediction of Tissue-Specific Gene Expression and Context-Dependent Gene Networks in Caenorhabditis Elegans
M. Chikina, C. Huttenhower, C. Murphy, O. Troyanskaya
Exploring the Human Genome with Functional Maps.
C. Huttenhower, E. Haley, M. Hibbs, V. Dumeaux, D. Barrett, H. Coller, O. Troyanskaya
Aneuploidy Prediction and Tumor Classification with Heterogeneous Hidden Conditional Random Fields
Z. Barutcuoglu, E. Airoldi, V. Dumeaux, R. Schapire, O. Troyanskaya
Computationally Driven, Quantitative Experiments Discover Genes Required for Mitochondrial Biogenesis
D. Hess, C. Myers, C. Huttenhower, M. Hibbs, A. Hayes, J. Paw, J. Clore, R. Mendoza, B. San Luis, C. Nislow, G. Giaever, M. Costanzo, O. Troyanskaya, A. Caudy
Directing Experimental Biology: A Case Study in Mitochondrial Biogenesis
M. Hibbs, C. Myers, C. Huttenhower , D. Hess, K. Li, A. Caudy, O. Troyanskaya
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