From the bioRxiv: A Selection of Recently Posted Papers from SCGB Investigators and Others

Each month, SCGB scans the bioRxiv and arXiv for interesting papers from the SCGB community and beyond.

A bidirectional network for appetite control in larval zebrafish

Caroline Lei Wee, Erin Yue Song, Robert Evan Johnson, Deepak Ailani, Owen Randlett, Jiyoon Kim, Maxim Nikitchenko, Armin Bahl, Chao-Tsung Yang, Misha B Ahrens, Koichi Kawakami, Florian Engert, and Samuel Kunes

bioRxiv posted 1 September 2019

[Abstract] [PDF]

 

The Imposition of Value on Odor: Transient and Persistent Representations of Odor Value in Prefrontal Cortex

Peter Y Wang, Cristian Boboila, Philip Shamash, Zheng Wu, Nicole P Stein, Larry F Abbott, and Richard Axel

bioRxiv posted 30 August 2019

[Abstract] [PDF]

 

Olfactory Landmarks and Path Integration Converge to Form a Cognitive Spatial Map

Walter M Fischler, Narendra Joshi, Virginia Devi-Chou, Lacey Kitch, Mark Schnitzer,Larry F Abbott, and Richard Axel

bioRxiv posted 30 August 2019

[Abstract] [PDF]

 

What is the dynamical regime of cerebral cortex?

Yashar Ahmadian, Kenneth D. Miller

arXiv posted 27 August 2019

[Abstract] [PDF]

 

A neural network model of flexible grasp movement generation

Jonathan A. Michaels, Stefan Schaffelhofer, Andres Agudelo-Toro, and Hansjoerg Scherberger

bioRxiv posted 24 August 2019

[Abstract] [PDF]

 

A global map of orientation tuning in mouse visual cortex

Paul G. Fahey, Taliah Muhammad, Cameron Smith, Emmanouil Froudarakis, Erick Cobos, Jiakun Fu, Edgar Y. Walker, Dimitri Yatsenko, Fabian H. Sinz, Jacob Reimer, and Andreas S. Tolias

bioRxiv posted 23 August 2019

[Abstract] [PDF]

 

One-time learning in a biologically-inspired Salience-affected Artificial Neural Network (SANN)

Leendert A Remmelzwaal, George F R Ellis, and Jonathan Tapson

bioRxiv posted 23 August 2019

[Abstract] [PDF]

 

An uncertainty principle for neural coding: Conjugate representations of position and velocity are mapped onto firing rates and co-firing rates of neural spike trains

Ryan Grgurich and Hugh Tad Blair

bioRxiv posted 22 August 2019

[Abstract] [PDF]

 

Hippocampal Remapping as Hidden State Inference

Honi Sanders, Matthew A Wilson, and Samuel J Gershman

bioRxiv posted 22 August 2019

[Abstract] [PDF]

 

A potential cortical precursor of visual word form recognition in untrained monkeys

Rishi Rajalingham, Kohitij Kar, Sachi Sanghavi, Stanislas Dehaene, James J. DiCarlo

bioRxiv posted 20 August 2019

[Abstract] [PDF]

 

Models of heterogeneous dopamine signaling in an insect learning and memory center

Linnie Jiang and Ashok Litwin-Kumar

bioRxiv posted 18 August 2019

[Abstract] [PDF]

 

Drifting codes within a stable coding scheme for working memory

Michael J. Wolff, Janina Jochim, Elkan G. Akyurek, Timothy J. Buschman, and Mark G. Stokes

bioRxiv posted 16 August 2019

[Abstract] [PDF]

 

Neurons that Function within an Integrator to Promote A Persistent Behavioral State in Drosophila

Yonil Jung, Ann Kennedy, Hui Chiu, Farhan Mohammad, Adam Claridge-Chang, and David J. Anderson

bioRxiv posted 15 August 2019

[Abstract] [PDF]

 

Separable codes for read-out of mouse primary visual cortex across attentional states

Ashley M Wilson, Jeffrey M Beck, and Lindsey L Glickfeld

bioRxiv posted 10 August 2019

[Abstract] [PDF]

 

A Causal Network Analysis of Neuromodulation in the Cortico-Subcortical Limbic Network

Shaoyu Qiao, Kevin A Brown, J. Isaac Sedillo, Breonna Ferrentino, and Bijan Pesaran

bioRxiv posted 10 August 2019

[Abstract] [PDF]

 

Low rank mechanisms underlying flexible visual representations

Douglas A Ruff, Cheng Xue, Lily E Kramer, Faisal Baqai, and Marlene R Cohen

bioRxiv posted 9 August 2019

[Abstract] [PDF]

 

A cross-species neural integration of gravity for motor optimisation

Jeremie Gaveau, Sidney Grospretre, Dora Angelaki, and Charalambos Papaxanthis

bioRxiv posted 8 August 2019

[Abstract] [PDF]

 

Dynamic control of cortical head-direction signal by angular velocity

Arseny Finkelstein, Hervè Rouault, Sandro Romani, and Nachum Ulanovsky

bioRxiv posted 8 August 2019

[Abstract] [PDF]

 

Neural Anatomy and Optical Microscopy (NAOMi) Simulation for evaluating calcium imaging methods

Adam S Charles, Alex Song, Jeffrey L Gauthier, Jonathan W Pillow and David W Tank

bioRxiv. posted 6 August 2019

[Abstract]

 

A theoretical model for focal seizure initiation, propagation, termination, and progression

Jyun-you Liou, Elliot H Smith, Lisa M Bateman, Samuel L Bruce, Guy M McKhann, Jr., Robert R Goodman, Ronald G Emerson, Catherine A Schevon, and Larry F Abbott

bioRxiv posted 3 August 2019

[Abstract] [PDF]

 

Representation of uncertainty in macaque visual cortex

Oliver J Hénaff, Zoe M Boundy-Singer, Kristof Meding, Corey M Ziemba, and Robbe LT Goris

bioRxiv posted 3 August 2019

[Abstract] [PDF]

 

Whole integration of neural connectomics, dynamics and bio-mechanics for identification of behavioral sensorimotor pathways in Caenorhabditis elegans

Jimin Kim, Julia A Santos, Mark J Alkema, and Eli Shlizerman

bioRxiv posted 3 August 2019

[Abstract] [PDF]

 

A neural network for online spike classification that improves decoding accuracy

Deepa Issar, Ryan Williamson, Sanjeev Khanna, and Matthew A Smith

bioRxiv posted 2 August 2019

[Abstract] [PDF]

 

Dopamine neuron ensembles signal the content of sensory prediction errors

Thomas Stalnaker, James Howard, Yuji Takahashi, Samuel J Gershman, Thorsten Kahnt, and Geoffrey Schoenbaum

bioRxiv posted 2 August 2019

[Abstract] [PDF]

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