From the bioRxiv: A Selection of Recently Posted Papers from SCGB Investigators and Others

Each month, SCGB scans the bioRxiv and arXiv for interesting papers from the SCGB community and beyond.

Population-level neural correlates of flexible avoidance learning in medial prefrontal cortex

Benjamin Ehret, Roman Boehringer, Elizabeth A. Amadei, Maria R. Cervera, Aniruddh Galgali, Christian Henning, Valerio Mante, and Benjamin F. Grewe

bioRxiv posted 2 January 2023

[Abstract] [PDF]

 

Learning Cortical Hierarchies with Temporal Hebbian Updates.

Pau Vilimelis Aceituno, Matilde Tristany Farinha, Reinhard Loidl, and Benjamin F. Grewe

bioRxiv posted 2 January 2023

[Abstract] [PDF]

 

An empirical assay of view-invariant object learning in humans and comparison with baseline image-computable models

Michael J. Lee and James J. DiCarlo

bioRxiv posted 2 January 2023

[Abstract]

 

The predictive power of intrinsic timescale during the perceptual decision-making process across the mouse brain

Elaheh Imani, Alireza Hashemi, Setayesh Radkani, Seth W Egger, and Morteza Moazami Goudarzi

bioRxiv posted 3 January 2023

[Abstract] [PDF]

 

Drifting representation with transient resets characterizes sensorimotor transformation in the monkey superior colliculus

Michelle R Heusser, Uday K Jagadisan, and Neeraj J Gandhi

bioRxiv posted 4 January 2023

[Abstract] [PDF]

 

Emergence of brain-like mirror-symmetric viewpoint tuning in convolutional neural networks.

Farzmahdi A, Zarco W, Freiwald W, Kriegeskorte N, Golan T.

bioRxiv 2023 Jan 5 2023

[Abstract]

 

Solving the spike sorting problem with Kilosort

Marius Pachitariu, Shashwat Sridhar, and Carsen Stringer

bioRxiv posted 7 January 2023

[Abstract] [PDF]

 

Stimulus-specific prediction error neurons in mouse auditory cortex

Nicholas J Audette and David M Schneider

bioRxiv posted 7 January 2023

[Abstract] [PDF]

 

Population-level interactions among PV, SOM, and Pyramidal neurons in cortex

Christian T Potter, Constanza D Bassi, and Caroline A Runyan

bioRxiv posted 9 January 2023

[Abstract] [PDF]

 

Low Rate Hippocampal Delay Period Activity Encodes Behavioral Experience

Markos Athanasiadis, Stefano Masserini, Li Yuan, Dustin Fetterhoff, Jill K Leutgeb, Stefan Leutgeb, and Christian Leibold

bioRxiv posted 9 January 2023

[Abstract] [PDF]

 

Estimation of animal location from grid cell population activity using persistent cohomology

Daisuke Kawahara and Shigeyoshi Fujisawa

bioRxiv posted 10 January 2023

[Abstract] [PDF]

 

Navigation and the Efficiency of Spatial Coding: Insights from Closed-Loop Simulations

Behnam Ghazinouri, Mohammadreza Mohagheghi Nejad, and Sen Cheng

bioRxiv posted 10 January 2023

[Abstract] [PDF]

 

Natural stimuli drive concerted nonlinear responses in populations of retinal ganglion cells

Dimokratis Karamanlis, Mohammad H. Khani, Helene M. Schreyer, Soeren J. Zapp, Matthias Mietsch, and Tim Gollisch

bioRxiv posted 10 January 2023

[Abstract] [PDF]

 

Comparing rapid rule-learning strategies in humans and monkeys

Vishwa Goudar, Jeong-Woo Kim, Yue Liu, Adam J. O. Dede, Michael J. Jutras, Ivan Skelin, Michael Ruvalcaba, William Chang, Adrienne L. Fairhall, Jack J. Lin, Robert T. Knight, Elizabeth A. Buffalo and Xiao-Jing Wang

bioRxiv posted 10 January 2023

[Abstract]

 

Functional specialization and structured representations for space and time in prefrontal cortex

Claudia Bohm and Albert K Lee

bioRxiv posted 18 January 2023

[Abstract] [PDF]

 

Primate superior colliculus is engaged in abstract higher-order cognition

Barbara Peysakhovich, Stephanie M. Tetrick, Alessandra A Silva, Sihai Li, Ou Zhu, Guilhem Ibos, W. Jeffrey Johnston, and David J. Freedman

bioRxiv posted 18 January 2023

[Abstract] [PDF]

 

Medial entorhinal cortex plays a specialized role in learning of flexible, context-dependent interval timing behavior

Erin R Bigus, Hyun-Woo Lee, Jiani Shi, and James G Heys

bioRxiv posted 18 January 2023

[Abstract] [PDF]

 

Dopamine enhances population coding of fear in prefrontal cortex.

Jeremy Lesas, Pierre Feugas, Cyril Herry, and Cyril Dejean

bioRxiv posted 18 January 2023

[Abstract] [PDF]

 

Circuit and cell-specific contributions to decision making involving risk of explicit punishment in male and female rats.

Leah M Truckenbrod, Sara M Betzhold, Alexa-Rae Wheeler, John Shallcross, Sarthak Singhal, Scott Harden, Marek Schwendt, Charles J. Frazier, Jennifer L. Bizon, Barry Setlow, and Caitlin A. Orsini

bioRxiv posted 18 January 2023

[Abstract] [PDF]

 

A recurrent network model of planning explains hippocampal replay and human behavior

Kristopher T. Jensen, Guillaume Hennequin, and Marcelo G. Mattar

bioRxiv posted 19 January 2023

[Abstract] [PDF]

 

Size tuning of neural response variability in laminar circuits of macaque primary visual cortex

Lauri Nurminen, Maryam Bijanzadeh, and Alessandra Angelucci

bioRxiv posted 19 January 2023

[Abstract] [PDF]

 

Motor cortex retains and reorients neural dynamics during motor imagery

Brian M Dekleva, Raeed H Chowdhury, Aaron P Batista, Steven M Chase, Byron M Yu, Michael L Boninger, and Jennifer L Collinger

bioRxiv posted 19 January 2023

[Abstract] [PDF]

 

Trial-history biases in evidence accumulation can give rise to apparent lapses

Diksha Gupta, Brian DePasquale, Charles D. Kopec and Carlos D. Brody

bioRxiv posted 20 January 2023

[Abstract]

 

Informing generative replay for continual learning with long-term memory formation in the fruit fly

Brian S Robinson, Justin Joyce, Raphael Norman-Tenazas, Gautam K Vallabha, and Erik C Johnson

bioRxiv posted 20 January 2023

[Abstract] [PDF]

 

Learning to predict future locations with internally generated theta sequences

Eloy Parra-Barrero and Sen Cheng

bioRxiv posted 20 January 2023

[Abstract] [PDF]

 

Adaptive robustness through incoherent signaling mechanisms in a regenerative brain

Samuel R Bray, Livia S Wyss, Chew Chai, Maria E Lozada, and Bo Wang

bioRxiv posted 23 January 2023

[Abstract] [PDF]

 

Cortical Representation of Movement Across the Developmental Transition to Continuous Neural Activity

Ryan M Glanz, Greta Sokoloff, and Mark S Blumberg

bioRxiv posted 22 January 2023

[Abstract] [PDF]

 

Rhythmically bursting songbird vocomotor neurons are organized into multiple sequences, suggesting a network/intrinsic properties model encoding song and error, not time

Graham C Fetterman and Daniel Margoliash

bioRxiv posted 23 January 2023

[Abstract] [PDF]

 

Neural dynamics in the rodent motor cortex enables flexible control of vocal timing

Arkarup Banerjee, Feng Chen, Shaul Druckmann, and Michael A. Long

bioRxiv posted 23 January 2023

[Abstract] [PDF]

 

Distinct nonlinear spectrotemporal integration in primary and secondary auditory cortices

Amber M Kline, Destinee A Aponte, and Hiroyuki K Kato

bioRxiv posted 26 January 2023

[Abstract] [PDF]

 

Remapping in a recurrent neural network model of navigation and context inference

Isabel IC Low, Lisa M Giocomo, and Alex H Williams

bioRxiv posted 27 January 2023

[Abstract] [PDF]

 

Anteromedial Thalamus Gates the Selection & Stabilization of Long-Term Memories

Andrew C Toader, Josue M Regalado, Yan Ran Li, Andrea Terceros, Nakul Yadav, Suraj Kumar, Sloane Satow, Florian Hollunder, Alessandra Bonito-Oliva, and Priyamvada Rajasethupathy

bioRxiv posted 28 January 2023

[Abstract] [PDF]

 

Prefrontal Cortex Encodes Value Pop-out in Visual Search

Mojtaba Abbaszadeh, Armin Panjehpour, Seyed Mohammad Amin Alemohammad, Ali Ghavampour, and Ali Ghazizadeh

bioRxiv posted 28 January 2023

[Abstract] [PDF]

 

Different time encoding strategies within the medial premotor areas of the primate

Hugo Merchant, Germán Mendoza, Oswaldo Pérez, Abraham Betancourt, Pamela Garcia-Saldivar, and Luis Prado

bioRxiv posted 29 January 2023

[Abstract] [PDF]

 

Competition between bottom-up visual input and internal inhibition generates error neurons in a model of the mouse primary visual cortex

Claudio Ruben Mirasso, Javier Galvan Fraile, Franz Scherr, Jose Javier Ramasco, Anton Arkhipov, and Wolfgang Maass

bioRxiv posted 30 January 2023

[Abstract] [PDF]

 

Causal inference during closed-loop navigation: parsing of self- and object-motion

Jean-Paul Noel, Johannes Bill, Haoran Ding, John Vastola, Gregory C DeAngelis, Dora Angelaki and Jan Drugowitsch

bioRxiv posted 30 January 2023

[Abstract]

 

Top-down control of exogenous attentional selection is mediated by beta coherence in prefrontal cortex.

Dubey A, Markowitz DA, Pesaran B.

bioRxiv 2023 Jan 13:2023.01.11.523664.

[Abstract]

 

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