From the bioRxiv: A Selection of Recently Posted Papers from SCGB Investigators and Others

Each month, SCGB scans the bioRxiv and arXiv for interesting papers from the SCGB community and beyond.

Motor cortical dynamics are shaped by multiple distinct subspaces during naturalistic behavior

Matthew G Perich, Sara Conti, Marion Badi, Andrew Bogaard, Beatrice Barra, Sophie Wurth, Jocelyne Bloch, Gregoire Courtine, Silvestro Micera, Marco Capogrosso, and Tomislav Milekovic

bioRxiv posted 31 July 2020

[Abstract] [Full Text] [PDF]


Computational Properties of the Visual Microcircuit

Gerald Hahn, Arvind Kumar, Helmut Schmidt, Thomas Knoesche, and Gustavo Deco

bioRxiv posted 30 July 2020

[Abstract] [PDF]


Efficiency of local learning rules in threshold-linear associative networks

Francesca Schonsberg, Yasser Roudi, and Alessandro Treves

bioRxiv posted 29 July 2020

[Abstract] [Full Text] [PDF]


Intrinsic excitability mechanisms of neuronal ensemble formation

Tzitzitlini Alejandre-Garcia, Samuel Kim, Jesus Esteban Perez-Ortega, and Rafael Yuste

bioRxiv posted 29 July 2020

[Abstract] [Full Text] [PDF]


The Mouse Action Recognition System (MARS): a software pipeline for automated analysis of social behaviors in mice

Cristina Segalin, Jalani Williams, Tomomi Karigo, May Hui, Moriel Zelikowsky, Jennifer J Sun, Pietro Perona, David J Anderson, and Ann Kennedy

bioRxiv posted 27 July 2020

[Abstract] [Full Text] [PDF]


Identifying signal and noise structure in neuralpopulation activity with Gaussian process factormodels

Stephen L Keeley, Mikio C Aoi, Yiyi Yu, Spencer LaVere Smith, and Jonathan W Pillow

bioRxiv posted 24 July 2020

[Abstract] [Full Text] [PDF]


An integrate-and-fire spiking neural network model simulating artificially induced cortical plasticity

Larry Shupe and Eberhard E. Fetz

bioRxiv posted 23 July 2020

[Abstract] [Full Text] [PDF]


Distributed Sampling-based Bayesian Inference in Coupled Neural Circuits

Wenhao Zhang, Tai Sing Lee, Brent Doiron, and Si Wu

bioRxiv posted 22 July 2020

[Abstract] [Full Text] [PDF]


Algorithms underlying flexible phototaxis in larval zebrafish

Alex B. Chen, Diptodip Deb, Armin Bahl, and Florian Engert

bioRxiv posted 19 July 2020

[Abstract] [Full Text] [PDF]


Dopamine axons to dorsal striatum encode contralateral stimuli and actions

Morgane M Moss, Peter Zatka-Haas, Kenneth D Harris, Matteo Carandini, and Armin Lak

bioRxiv posted 16 July 2020

[Abstract] [Full Text] [PDF]


A correspondence between normalization strategies in artificial and biological neural networks

Yang Shen, Julia Wang, and Saket Navlakha

bioRxiv posted 17 July 2020

[Abstract] [Full Text] [PDF]


Knowledge across networks: how to build a global neuroscience collaboration

Lauren Wool and the IBL

PsyArXiv posted 14 July



Neural Network Poisson Models for Behavioural and Neural Spike Train Data

Amir Dezfouli, Richard Nock, Ehsan Arabzadeh, Peter Dayan

arXiv posted 14 July 2020



Biological credit assignment through dynamic inversion of feedforward networks

William F. Podlaski, Christian K. Machens

arXiv posted 10 July 2020



Topographic deep artificial neural networks reproduce the hallmarks of the primate inferior temporal cortex face processing network

Hyodong Lee, Eshed Margalit, Kamila Jozwik, Michael A. Cohen, Nancy G Kanwisher, Daniel Yamins, and James DiCarlo

bioRxiv posted 10 July 2020

[Abstract] [Full Text] [PDF]


Robust single neuron tracking of calcium imaging in behaving Hydra

Thibault Lagache, Alison Hanson, Adrienne Fairhall, and Rafael Yuste

bioRxiv posted 6 July 2020

[Abstract] [Full Text] [PDF]


Complementary roles of dimensionality and population structure in neural computations

Alexis M Dubreuil, Adrian Valente, Manuel Beiran, Francesca Mastrogiuseppe, and Srdjan Ostojic

bioRxiv posted 4 July 2020

[Abstract] [Full Text] [PDF]


Trial-by-trial variability in cortical responses exhibits scaling in spatial correlations predicted from critical dynamics

Tiago Lins-Ribeiro, Shan Yu, Daniel A. Martin, Daniel Winkowski, Patrick Kanold, Dante R. Chialvo, and Dietmar Plenz

bioRxiv posted 2 July 2020

[Abstract] [Full Text] [PDF]


Pinpointing the neural signatures of single-exposure visual familiarity

Vahid Mehrpour, Travis Meyer, Eero P. Simoncelli, Nicole C. Rust

bioRxiv posted 2 July 2020


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