From the bioRxiv: A Selection of Recently Posted Papers from SCGB Investigators and Others

Each month, SCGB scans the bioRxiv and arXiv for interesting papers from the SCGB community and beyond.

When and why does motor preparation arise in recurrent neural network models of motor control?

Marine Schimel, Ta-Chu Kao, and Guillaume Hennequin

bioRxiv posted 3 April 2023 doi:10.1101/2023.04.03.535429

[Abstract] [PDF]

Behavior-relevant top-down cross-modal predictions in mouse neocortex

Shuting Han and Fritjof Helmchen

bioRxiv posted 3 April 2023 doi:10.1101/2023.04.03.535389

[Abstract] [PDF]

Correlated signatures of social behavior in cerebellum and anterior cingulate cortex

Sung Won Hur, Karen Safaryan, Long Yang, Hugh T Blair, Sotiris C Masmanidis, Paul J Mathews, Daniel Aharoni, and Peyman Golshani

bioRxiv posted 5 April 2023 doi:10.1101/2023.04.05.535750

[Abstract] [PDF]

Neural computation through sensorimotor dynamics for predictive sensorimotor control

Yiheng Zhang, Yun Chen, Tianwei Wang, and He Cui

bioRxiv posted 6 April 2023 doi:10.1101/2023.04.06.535795

[Abstract] [PDF]

End-to-end deep learning approach to mouse behavior classification from cortex-wide calcium imaging

Takehiro Ajioka, Nobuhiro Nakai, Okito Yamashita, and Toru Takumi

bioRxiv posted 6 April 2023 doi:10.1101/2023.04.05.535664

[Abstract] [PDF]

Multiplicative Joint Coding in Preparatory Activity for Reaching Sequence in Macaque Motor Cortex

Tianwei Wang, Yun Chen, Yiheng Zhang, and He Cui

bioRxiv posted 6 April 2023 doi:10.1101/2023.04.05.535305

[Abstract] [PDF]

Emergence of belief-like representations through reinforcement learning

Jay Hennig, Sandra A. Romero Pinto, Takahiro Yamaguchi, Scott W. Linderman, Naoshige Uchida, and Samuel J. Gershman

bioRxiv posted 7 April 2023 doi:10.1101/2023.04.04.535512

[Abstract] [PDF]

Coding of time with non-linear mixed selectivity in Prefrontal Cortex ensembles

Catherine Mikkelsen, Stephen J Charczynski, Melissa R Warden, Earl K Miller, and Marc Howard

bioRxiv posted 7 April 2023 doi:10.1101/2023.04.07.535754

[Abstract] [PDF]

Neural coding of multiple motion speeds in visual cortical area MT

Xin Huang, Bikalpa Ghimire, Anjani Sreeprada Chakrala, and Steven Wiesner

bioRxiv posted 8 April 2023 doi:10.1101/2023.04.08.532456

[Abstract] [PDF]

Simultaneous representation of multiple time horizons by entorhinal grid cells and CA1 place cells

Prannoy Chaudhuri-Vayalambrone, Michael E Rule, Marius Bauza, Marino Krstulovic, Pauline Kerekes, Stephen Burton, Timothy O’Leary, and Julija Krupic

bioRxiv posted 9 April 2023 doi:10.1101/2023.04.09.536160

[Abstract] [PDF]

Wide-field calcium imaging of cortical activation and functional connectivity in externally- and internally-driven locomotion

Sarah L. West, Morgan L. Gerhart, and Timothy J. Ebner

bioRxiv posted 11 April 2023 doi:10.1101/2023.04.10.536261

[Abstract] [PDF]

Trained recurrent neural networks develop phase-locked limit cycles in a working memory task

Matthijs Pals, Jakob H Macke, and Omri Barak

bioRxiv posted 11 April 2023 doi:10.1101/2023.04.11.536352

[Abstract] [PDF]

Somatic Calcium Signals from Layer II/III Motor Cortex for Continuous Neural Decoding

Ruixue Wang, Jiawei Han, Xiaoling Hu, Heecheon You, and Shaomin Zhang

bioRxiv posted 11 April 2023 doi:10.1101/2023.04.11.536319

[Abstract] [PDF]

Gaze-centered gating and re-activation of value encoding in orbitofrontal cortex

Demetrio Ferro, Tyler Cash-Padgett, Maya Zhe-Wang, Benjamin Hayden, and Rubén Moreno-Bote

bioRxiv posted 21 April 2023 doi:10.1101/2023.04.20.537677

[Abstract] [PDF]

Translating deep learning to neuroprosthetic control

Darrel R. Deo, Francis R. Willett, Donald T. Avansino, Leigh R. Hochberg, Jaimie M. Henderson, and Krishna V. Shenoy

bioRxiv posted 21 April 2023 doi:10.1101/2023.04.21.537581

[Abstract] [PDF]

Factorized visual representations in the primate visual system and deep neural networks

Jack W Lindsey and Elias B Issa

bioRxiv posted 22 April 2023 doi:10.1101/2023.04.22.537916

[Abstract] [PDF]

Latent Representations in Hippocampal Network Model Co-Evolve with Behavioral Exploration of Task Structure

Ian Cone and Claudia Clopath

bioRxiv posted 24 April 2023 doi:10.1101/2023.04.24.538070

[Abstract] [PDF]

Superior colliculus cell types bidirectionally modulate choice activity in frontal cortex

Alyse M. Thomas, Weiguo Yang, Catherine Wang, Sri Laasya Tipparaju, Guang Chen, Brennan J. Sullivan, Kylie Swiekatowski, Mahima Tatam, Charles R. Gerfen, and Nuo Li

bioRxiv posted 24 April 2023 doi:10.1101/2023.04.22.537884

[Abstract] [PDF]

Learning shapes neural geometry in the prefrontal cortex

Michal J. Wojcik, Jake P. Stroud, Dante F. Wasmuht, Makoto Kusunoku, Mikiko Kadohisa, Nicholas E. Myers, Laurence T. Hunt, John Duncan, and Mark G. Stokes

bioRxiv posted 24 April 2023 doi:10.1101/2023.04.24.538054

[Abstract] [PDF]

Contextual modulation is a stable feature of the neural code in auditory cortex of awake mice

Marios Akritas, Alex G. Armstrong, Jules M. Lebert, Arne F. Meyer, Maneesh Sahani, and Jennifer F. Linden

bioRxiv posted 24 April 2023 doi:10.1101/2023.04.22.537782

[Abstract] [PDF]

Human-level reinforcement learning performance of recurrent neural networks is linked to hyperperseveration, not directed exploration

Deniz Tuzsus, Ioannis Pappas, and Jan Peters

bioRxiv posted 27 April 2023 doi:10.1101/2023.04.27.538570

[Abstract] [PDF]

Visually evoked neuronal ensembles reactivate during sleep

Justin Lines and Rafael Yuste

bioRxiv posted 27 April 2023 doi:10.1101/2023.04.26.538480

[Abstract] [PDF]

The mechanics of correlated variability in segregated cortical excitatory subnetworks

Alex Negrón, Matthew P Getz, Gregory Handy, and Brent Doiron

bioRxiv posted 27 April 2023 doi:10.1101/2023.04.25.538323

[Abstract] [PDF]

Repetition plasticity in primary auditory cortex occurs across long timescales for spectrotemporally randomized pure-tones

Nasiru K. Gill and Nikolas A. Francis

bioRxiv posted 28 April 2023 doi:10.1101/2023.04.26.538446

[Abstract] [PDF]

Data-based large-scale models provide a window into the organization of cortical computations

Guozhang Chen, Franz Scherr, and Wolfgang Maass

bioRxiv posted 28 April 2023 doi:10.1101/2023.04.28.538662

[Abstract] [PDF]

Behavioral strategy shapes activation of the Vip-Sst disinhibitory circuit in visual cortex

Alex Piet, Nick Ponvert, Douglas Ollerenshaw, Marina Garrett, Peter A. Groblewski, Shawn Olsen, Christof Koch, and Anton Arkhipov

bioRxiv posted 29 April 2023 doi:10.1101/2023.04.28.538575

[Abstract] [PDF]

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