2697 Publications

Absorption Spectra of Solids from Periodic Equation-of-Motion Coupled-Cluster Theory

X. Wang, Timothy C. Berkelbach
We present ab initio absorption spectra of six three-dimensional semiconductors and insulators calculated using Gaussian-based periodic equation-of-motion coupled-cluster theory with single and double excitations (EOM-CCSD). The spectra are calculated efficiently by solving a system of linear equations at each frequency, giving access to an energy range of tens of eV without explicit enumeration of excited states. We assess the impact of Brillouin zone sampling, for which it is hard to achieve convergence due to the cost of EOM-CCSD. Although our most converged spectra exhibit lineshapes that are in good agreement with experiment, they are uniformly shifted to higher energies by about 1 eV. We tentatively attribute this discrepancy to a combination of vibrational effects and the remaining electron correlation, i.e., triple excitations and above.
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Quantum Sampling Algorithms for Near-Term Devices

Dominik S. Wild, D. Sels, Hannes Pichler, Cristian Zanoci, Mikhail D. Lukin
Efficient sampling from a classical Gibbs distribution is an important computational problem with applications ranging from statistical physics over Monte Carlo and optimization algorithms to machine learning. We introduce a family of quantum algorithms that provide unbiased samples by preparing a state encoding the entire Gibbs distribution. We show that this approach leads to a speedup over a classical Markov chain algorithm for several examples including the Ising model and sampling from weighted independent sets of two different graphs. Our approach connects computational complexity with phase transitions, providing a physical interpretation of quantum speedup. Moreover, it opens the door to exploring potentially useful sampling algorithms on near-term quantum devices as the algorithm for sampling from independent sets on certain graphs can be naturally implemented using Rydberg atom arrays.
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Quantum sampling algorithms, phase transitions, and computational complexity

Dominik S. Wild, D. Sels, Hannes Pichler, Cristian Zanoci, Mikhail D. Lukin
Drawing independent samples from a probability distribution is an important computational problem with applications in Monte Carlo algorithms, machine learning, and statistical physics. The problem can in principle be solved on a quantum computer by preparing a quantum state that encodes the entire probability distribution followed by a projective measurement. We investigate the complexity of adiabatically preparing such quantum states for the Gibbs distributions of various classical models including the Ising chain, hard-sphere models on different graphs, and a model encoding the unstructured search problem. By constructing a parent Hamiltonian, whose ground state is the desired quantum state, we relate the asymptotic scaling of the state preparation time to the nature of transitions between distinct quantum phases. These insights enable us to identify adiabatic paths that achieve a quantum speedup over classical Markov chain algorithms. In addition, we show that parent Hamiltonians for the problem of sampling from independent sets on certain graphs can be naturally realized with neutral atoms interacting via highly excited Rydberg states.
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From high-T

Michael Klett, Tilman Schwemmer, Sebastian Wolf, Xianxin Wu, David Riegler, Andreas Dittmaier, D. Di Sante, Gang Li, Werner Hanke, Stephan Rachel, Ronny Thomale
Despite the structural resemblance of certain cuprate and nickelate parent compounds there is a striking spread of T
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Design and realization of topological Dirac fermions on a triangular lattice

Maximilian Bauernfeind, Jonas Erhardt, Philipp Eck, Pardeep K. Thakur, Judith Gabel, Tien-Lin Lee, Jörg Schäfer, Simon Moser, D. Di Sante, Ralph Claessen, Giorgio Sangiovanni
Large-gap quantum spin Hall insulators are promising materials for room-temperature applications based on Dirac fermions. Key to engineer the topologically non-trivial band ordering and sizable band gaps is strong spin-orbit interaction. Following Kane and Mele's original suggestion, one approach is to synthesize monolayers of heavy atoms with honeycomb coordination accommodated on templates with hexagonal symmetry. Yet, in the majority of cases, this recipe leads to triangular lattices, typically hosting metals or trivial insulators. Here, we conceive and realize "indenene", a triangular monolayer of indium on SiC exhibiting non-trivial valley physics driven by local spin-orbit coupling, which prevails over inversion-symmetry breaking terms. By means of tunneling microscopy of the 2D bulk we identify the quantum spin Hall phase of this triangular lattice and unveil how a hidden honeycomb connectivity emerges from interference patterns in Bloch p
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Chemical evidence for planetary ingestion in a quarter of Sun-like stars

Lorenzo Spina, Parth Sharma, Jorge Meléndez, M. Bedell, et. al.

Stellar members of binary systems are formed from the same material, therefore they should be chemically identical. However, recent high-precision studies have unveiled chemical differences between the two members of binary pairs composed by Sun-like stars. The very existence of these chemically inhomogeneous binaries represents one of the most contradictory examples in stellar astrophysics and source of tension between theory and observations. It is still unclear whether the abundance variations are the result of chemical inhomogeneities in the protostellar gas clouds or instead if they are due to planet engulfment events occurred after the stellar formation. While the former scenario would undermine the belief that the chemical makeup of a star provides the fossil information of the environment where it formed, a key assumption made by several studies of our Galaxy, the second scenario would shed light on the possible evolutionary paths of planetary systems. Here, we perform a statistical study on 107 binary systems composed by Sun-like stars to provide - for the first time - unambiguous evidence in favour of the planet engulfment scenario. We also establish that planet engulfment events occur in stars similar to our own Sun with a probability ranging between 20 and 35%. This implies that a significant fraction of planetary systems undergo very dynamical evolutionary paths that can critically modify their architectures, unlike our Solar System which has preserved its planets on nearly circular orbits. This study also opens to the possibility of using chemical abundances of stars to identify which ones are the most likely to host analogues of the calm Solar System.

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Toward performance-portable PETSc for GPU-based exascale systems

Richard Tran Mills, Mark F. Adams, Satish Balay, Jed Brown, Alp Dener, Matthew Knepley, Scott E. Kruger, Hannah Morgan, Todd Munson, Karl Rupp, B. Smith, Stefano Zampini, Hong Zhang, Junchao Zhang

The Portable Extensible Toolkit for Scientific computation (PETSc) library delivers scalable solvers for nonlinear time-dependent differential and algebraic equations and for numerical optimization. The PETSc design for performance portability addresses fundamental GPU accelerator challenges and stresses flexibility and extensibility by separating the programming model used by the application from that used by the library, and it enables application developers to use their preferred programming model, such as Kokkos, RAJA, SYCL, HIP, CUDA, or OpenCL, on upcoming exascale systems. A blueprint for using GPUs from PETSc-based codes is provided, and case studies emphasize the flexibility and high performance achieved on current GPU-based systems.

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Attenuated activation of pulmonary immune cells in mRNA-1273–vaccinated hamsters after SARS-CoV-2 infection

Michelle Meyer, X. Chen, O. Troyanskaya, et al.

The mRNA-1273 vaccine is effective against SARS-CoV-2 and was granted emergency use authorization by the FDA. Clinical studies, however, cannot provide the controlled response to infection and complex immunological insight that are only possible with preclinical studies. Hamsters are the only model that reliably exhibits severe SARS-CoV-2 disease similar to that in hospitalized patients, making them pertinent for vaccine evaluation. We demonstrate that prime or prime-boost administration of mRNA-1273 in hamsters elicited robust neutralizing antibodies, ameliorated weight loss, suppressed SARS-CoV-2 replication in the airways, and better protected against disease at the highest prime-boost dose. Unlike in mice and nonhuman primates, low-level virus replication in mRNA-1273–vaccinated hamsters coincided with an anamnestic response. Single-cell RNA sequencing of lung tissue permitted high-resolution analysis that is not possible in vaccinated humans. mRNA-1273 prevented inflammatory cell infiltration and the reduction of lymphocyte proportions, but enabled antiviral responses conducive to lung homeostasis. Surprisingly, infection triggered transcriptome programs in some types of immune cells from vaccinated hamsters that were shared, albeit attenuated, with mock-vaccinated hamsters. Our results support the use of mRNA-1273 in a 2-dose schedule and provide insight into the potential responses within the lungs of vaccinated humans who are exposed to SARS-CoV-2.

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Topological braiding and virtual particles on the cell membrane

Jinghui Liu, Jan F. Totz, P. Miller

Braiding of topological structures in complex matter fields provides a robust framework for encoding and processing information, and it has been extensively studied in the context of topological quantum computation. In living systems, topological defects are crucial for the localization and organization of biochemical signaling waves, but their braiding dynamics remain unexplored. Here, we show that the spiral wave cores, which organize the Rho-GTP protein signaling dynamics and force generation on the membrane of starfish egg cells, undergo spontaneous braiding dynamics. Experimentally measured world line braiding exponents and topological entropy correlate with cellular activity and agree with predictions from a generic field theory. Our analysis further reveals the creation and annihilation of virtual quasi-particle excitations during defect scattering events, suggesting phenomenological parallels between quantum and living matter.

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