From the bioRxiv: A Selection of Recently Posted Papers from SCGB Investigators and Others

Each month, SCGB scans the bioRxiv for interesting papers from the SCGB community and beyond.

Visual cue-related activity of cells in the medial entorhinal cortex during navigation in virtual reality

Amina Kinkhabwala, Yi Gu, Dmitriy Aronov, and David W Tank

bioRxiv posted 25 October 2018

[Abstract] [PDF]

 

Dopamine modulation of prefrontal cortex activity is manifold and operates at multiple temporal and spatial scales

Sweyta Lohani, Adria K Martig, Karl Deisseroth, Ilana Witten, and Bita Moghaddam

bioRxiv posted 25 October 2018

[Abstract] [PDF]

 

Stimulus domain transfer in recurrent models for large scale cortical population prediction on video

Fabian H. Sinz, Alexander S. Ecker, Paul G. Fahey, Edgar Y Walker, Erick Cobos, Emmanouil Froudarakis, Dimitri Yatsenko, Xaq Pitkow, Jacob Reimer, and Andreas S. Tolias

bioRxiv posted 25 October 2018

[Abstract] [PDF]

 

Bayesian inference of neuronal ensembles

Giovanni Diana, Thomas T. J. Sainsbury, and Martin P Meyer

bioRxiv posted 25 October 2018

[Abstract] [PDF]

 

Value representations do not explain movement selectivity in DMS-projecting dopamine neurons

Rachel S. Lee, Marcelo G. Mattar, Nathan F. Parker, Ilana B. Witten, and Nathaniel D. Daw

bioRxiv posted 19 October 2018

[Abstract] [PDF]

 

Searching for collective behavior in a small brain

Xiaowen Chen, Francesco Randi, Andrew M. Leifer, William Bialek

arXiv posted 17 October 2018

[Abstract] [PDF]

 

An Analysis of Decision Under Risk in Rats

Christine M Constantinople, Alex T Piet, and Carlos D Brody

bioRxiv posted 17 October 2018

[Abstract] [PDF]

 

Predicting natural behavior from whole-brain neural dynamics

Monika Scholz, Ashley N Linder, Francesco Randi, Anuj K Sharma, Xinwei Yu, Joshua W Shaevitz, and Andrew Leifer

bioRxiv posted 17 October 2018

[Abstract] [PDF]

 

Coherent neuronal dynamics driven by optogenetic stimulation in the primate brain

Ryan A Shewcraft, Heather L Dean, Yan T Wong, Maureen A Hagan, Margaret M Fabiszak, and Bijan Pesaran

bioRxiv posted 16 October 2018

[Abstract] [PDF]

 

Biologically Plausible Online Principal Component Analysis Without Recurrent Neural Dynamics

Victor Minden, Cengiz Pehlevan, Dmitri B. Chklovskii

arXiv posted 16 Oct 2018

[Abstract] [PDF]

 

Marked point process filter for clusterless and adaptive encoding-decoding of multiunit activity

Kensuke Arai, Daniel F Liu, Loren M. Frank, and Uri T. Eden

bioRxiv posted 13 October 2018

[Abstract] [PDF]

 

Anticipatory neural activity improves the decoding accuracy for dynamic head-direction signals

Johannes Zirkelbach, Martin Stemmler, and Andreas Herz

bioRxiv posted 11 October 2018

[Abstract] [PDF]

 

Bright and photostable chemigenetic indicators for extended in vivo voltage imaging

Ahmed S. Abdelfattah, Takashi Kawashima, Amrita Singh, Ondrej Novak, Hui Liu, Yichun Shuai, Yi-Chieh Huang, Jonathan B. Grimm, Ronak Patel, Johannes Friedrich, Brett D. Mensh, Liam Paninski, John J. Macklin, Kaspar Podgorski, Bei-Jung Lin, Tsai-Wen Chen, Glenn C. Turner, Zhe Liu, Minoru Koyama, Karel Svoboda, Misha B. Ahrens, Luke D. Lavis, Eric R. Schreiter

bioRxiv posted 6 October 2018

[Abstract] [PDF]

 

Neuronal adaptation reveals a suboptimal decoding of orientation tuned populations in the mouse visual cortex

Miaomiao Jin, Jeffrey M Beck, and Lindsey Glickfeld

bioRxiv posted 3 October 2018

[Abstract] [PDF]

 

High-performance GFP-based calcium indicators for imaging activity in neuronal populations and microcompartments

Hod Dana, Yi Sun, Boaz Mohar, Brad Hulse, Jeremy P Hasseman, Getahun Tsegaye, Arthur Tsang, Allan Wong, Ronak Patel, John J Macklin, Yang Chen, Arthur Konnerth, Vivek Jayaraman, Loren L Looger, Eric R Schreiter, Karel Svoboda, and Douglas S Kim

bioRxiv posted 3 October 2018

[Abstract] [PDF]

 

Heading direction with respect to a reference point modulates place-cell activity

Pablo E Jercog, Yashar Ahmadian, Caitlin Woodruff, Rajeev Deb-Sen, Laurence F Abbott, and Eric R Kandel

bioRxiv posted 2 October 2018

[Abstract] [PDF]

 

Discrete stepping and nonlinear ramping dynamics underlie spiking responses of LIP neurons during decision-making

David M. Zoltowski, Kenneth W. Latimer, Jacob L. Yates, Alexander C. Huk, and Jonathan W. Pillow

bioRxiv posted 2 October 2018

[Abstract] [PDF]

 

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